RNA–Protein interactions for RNA: ENST00000528062.7

RBM39-243, Transcript of RNA binding motif protein 39, humanhuman

TSL 1 (best) BASIC

Gene RBM39, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-243ENST00000528062 CCNOP22674 350 aa11.03□□□□□ -0.64
RBM39-243ENST00000528062 FGF12P61328 243 aa11.03□□□□□ -0.64
RBM39-243ENST00000528062 IZUMO4Q1ZYL8 232 aa11.03□□□□□ -0.64
RBM39-243ENST00000528062 C9orf135Q5VTT2 229 aa11.03□□□□□ -0.64
RBM39-243ENST00000528062 CDPF1Q6NVV7 123 aa11.03□□□□□ -0.64
RBM39-243ENST00000528062 SVIPQ8NHG7 77 aa11.03□□□□□ -0.64
RBM39-243ENST00000528062 FAM57AQ8TBR7 257 aa11.03□□□□□ -0.64
RBM39-243ENST00000528062 GNPNAT1Q96EK6 184 aaPredicted RBP11.03□□□□□ -0.64
RBM39-243ENST00000528062 TOLLIPQ9H0E2 274 aa11.03□□□□□ -0.64
RBM39-243ENST00000528062 CLCF1Q9UBD9 225 aa11.03□□□□□ -0.64
RBM39-243ENST00000528062 FREM1Q5H8C1 2179 aa11.02□□□□□ -0.64
RBM39-243ENST00000528062 ZNF462Q96JM2 2506 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 A0A087WWC5 75 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 FAM90A10PA6NDY2 464 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 FAM90A18PA6NE21 464 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 FAM90A16PA6NEW6 464 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 FAM90A20PA6NIJ5 464 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 FAM90A8PA6NJQ4 464 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 FAM90A7PA6NKC0 464 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 FAM90A22PA8MWA6 464 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 FAM90A12PA8MX19 464 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 FAM90A5PA8MXJ8 464 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 FAM90A23PA8MXZ1 464 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 HSPB1P04792 205 aaKnown RBP11.02□□□□□ -0.65
RBM39-243ENST00000528062 FAM90A15PP0C7V4 464 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 FAM90A13PP0C7W8 464 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 FAM90A14PP0C7W9 464 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 FAM90A24PP0C7X0 464 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 RD3LP0DJH9 198 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 NDUFA6P56556 154 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 BAXQ07812 192 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 MRPL49Q13405 166 aaKnown RBP11.02□□□□□ -0.65
RBM39-243ENST00000528062 ACSF3Q4G176 576 aaPredicted RBP11.02□□□□□ -0.65
RBM39-243ENST00000528062 PYY3Q5JQD4 70 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 AKR1C8PQ5T2L2 129 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 ST6GALNAC3Q8NDV1 305 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 ATP5SQ99766 215 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 UNKLQ9H9P5 680 aaKnown RBP11.02□□□□□ -0.65
RBM39-243ENST00000528062 DOK5Q9P104 306 aa11.02□□□□□ -0.65
RBM39-243ENST00000528062 INTS1Q8N201 2190 aaKnown RBP11.02□□□□□ -0.65
RBM39-243ENST00000528062 A0A096LPE4 126 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 A0A1W2PPZ6 126 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 ZNF503-AS2A6NEH8 195 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 PGLYRP1O75594 196 aaPredicted RBP11.01□□□□□ -0.65
RBM39-243ENST00000528062 FOXG1P55316 489 aaPredicted RBP11.01□□□□□ -0.65
RBM39-243ENST00000528062 SRSF7Q16629 238 aaKnown RBP eCLIP11.01□□□□□ -0.655e-7■■■□□ 16.7
RBM39-243ENST00000528062 ZNF674Q2M3X9 581 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 SPNS3Q6ZMD2 512 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 DOLPP1Q86YN1 238 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 CMTM1Q8IZ96 169 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 OR5D13Q8NGL4 314 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 HIVEP3Q5T1R4 2406 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 ADGRG4Q8IZF6 3080 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 DUXBA0A1W2PPF3 345 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 KIAA1324LA8MWY0 1029 aaPredicted RBP11.01□□□□□ -0.65
RBM39-243ENST00000528062 H0Y980 276 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 SYNGR1O43759 233 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 CYTIPO60759 359 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 CDX1P47902 265 aaPredicted RBP11.01□□□□□ -0.65
RBM39-243ENST00000528062 TAS2R30P59541 319 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 TLE1Q04724 770 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 TMEM267Q0VDI3 215 aaPredicted RBP11.01□□□□□ -0.65
RBM39-243ENST00000528062 ZNF488Q96MN9 340 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 PRRG4Q9BZD6 226 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 ATP23Q9Y6H3 246 aa11.01□□□□□ -0.65
RBM39-243ENST00000528062 HLA-HP01893 362 aa11□□□□□ -0.65
RBM39-243ENST00000528062 MMP9P14780 707 aa11□□□□□ -0.65
RBM39-243ENST00000528062 RPL23AP62750 156 aaKnown RBP11□□□□□ -0.65
RBM39-243ENST00000528062 ARF1P84077 181 aaKnown RBP11□□□□□ -0.65
RBM39-243ENST00000528062 Q6ZRM9 215 aa11□□□□□ -0.65
RBM39-243ENST00000528062 THNSL2Q86YJ6 484 aa11□□□□□ -0.65
RBM39-243ENST00000528062 MRPL30Q8TCC3 161 aaKnown RBP11□□□□□ -0.65
RBM39-243ENST00000528062 NEK7Q8TDX7 302 aa11□□□□□ -0.65
RBM39-243ENST00000528062 GPR146Q96CH1 333 aa11□□□□□ -0.65
RBM39-243ENST00000528062 TVP23CQ96ET8 276 aa11□□□□□ -0.65
RBM39-243ENST00000528062 HIPK2Q9H2X6 1198 aa11□□□□□ -0.65
RBM39-243ENST00000528062 ESPL1Q14674 2120 aa11□□□□□ -0.65
RBM39-243ENST00000528062 PCNX1Q96RV3 2341 aa11□□□□□ -0.65
RBM39-243ENST00000528062 LOC102723971A0A1B0GUV8 181 aa11□□□□□ -0.65
RBM39-243ENST00000528062 WRBO00258 174 aa11□□□□□ -0.65
RBM39-243ENST00000528062 HIST1H2BKO60814 126 aa11□□□□□ -0.65
RBM39-243ENST00000528062 HIST1H2BJP06899 126 aa11□□□□□ -0.65
RBM39-243ENST00000528062 HIST1H2BOP23527 126 aa11□□□□□ -0.65
RBM39-243ENST00000528062 HIST1H2BBP33778 126 aa11□□□□□ -0.65
RBM39-243ENST00000528062 GLIPR1P48060 266 aa11□□□□□ -0.65
RBM39-243ENST00000528062 HIST1H2BDP58876 126 aa11□□□□□ -0.65
RBM39-243ENST00000528062 RAB2AP61019 212 aa11□□□□□ -0.65
RBM39-243ENST00000528062 HIST1H2BCP62807 126 aa11□□□□□ -0.65
RBM39-243ENST00000528062 IL24Q13007 206 aa11□□□□□ -0.65
RBM39-243ENST00000528062 IGFBP7Q16270 282 aa11□□□□□ -0.65
RBM39-243ENST00000528062 HIST2H2BEQ16778 126 aa11□□□□□ -0.65
RBM39-243ENST00000528062 CEACAM21Q3KPI0 293 aa11□□□□□ -0.65
RBM39-243ENST00000528062 HIST2H2BFQ5QNW6 126 aaPredicted RBP11□□□□□ -0.65
RBM39-243ENST00000528062 ZNF610Q8N9Z0 462 aa11□□□□□ -0.65
RBM39-243ENST00000528062 C9orf106Q8NAJ2 232 aa11□□□□□ -0.65
RBM39-243ENST00000528062 HIST1H2BHQ93079 126 aa11□□□□□ -0.65
RBM39-243ENST00000528062 HIST1H2BNQ99877 126 aa11□□□□□ -0.65
RBM39-243ENST00000528062 HIST1H2BMQ99879 126 aa11□□□□□ -0.65
RBM39-243ENST00000528062 NIPSNAP3BQ9BS92 247 aa11□□□□□ -0.65
RBM39-243ENST00000528062 VSIRQ9H7M9 311 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms