RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 TM2D3Q9BRN9 247 aa12.44□□□□□ -0.42
PTPRU-210ENST00000527027 TOLLIPQ9H0E2 274 aa12.44□□□□□ -0.42
PTPRU-210ENST00000527027 MRPS18AQ9NVS2 196 aaKnown RBP12.44□□□□□ -0.42
PTPRU-210ENST00000527027 CSMD3Q7Z407 3707 aa12.44□□□□□ -0.42
PTPRU-210ENST00000527027 LDLRAD4O15165 306 aa12.43□□□□□ -0.42
PTPRU-210ENST00000527027 LIMS3P0CW19 117 aa12.43□□□□□ -0.42
PTPRU-210ENST00000527027 LIMS4P0CW20 117 aa12.43□□□□□ -0.42
PTPRU-210ENST00000527027 ADARB1P78563 741 aaKnown RBP12.43□□□□□ -0.42
PTPRU-210ENST00000527027 RAB12Q6IQ22 244 aa12.43□□□□□ -0.42
PTPRU-210ENST00000527027 C8orf59Q8N0T1 100 aaPredicted RBP12.43□□□□□ -0.42
PTPRU-210ENST00000527027 NPBQ8NG41 125 aa12.43□□□□□ -0.42
PTPRU-210ENST00000527027 ARPC1AQ92747 370 aa12.43□□□□□ -0.42
PTPRU-210ENST00000527027 ORAI1Q96D31 301 aa12.43□□□□□ -0.42
PTPRU-210ENST00000527027 MRPS24Q96EL2 167 aaKnown RBP12.43□□□□□ -0.42
PTPRU-210ENST00000527027 OR4C12Q96R67 309 aa12.43□□□□□ -0.42
PTPRU-210ENST00000527027 NABP2Q9BQ15 211 aa12.43□□□□□ -0.42
PTPRU-210ENST00000527027 TAF9BQ9HBM6 251 aa12.43□□□□□ -0.42
PTPRU-210ENST00000527027 TPSG1Q9NRR2 321 aa12.43□□□□□ -0.42
PTPRU-210ENST00000527027 MRPS28Q9Y2Q9 187 aaKnown RBP12.43□□□□□ -0.42
PTPRU-210ENST00000527027 RPL36Q9Y3U8 105 aaKnown RBP12.43□□□□□ -0.42
PTPRU-210ENST00000527027 PEX16Q9Y5Y5 336 aa12.43□□□□□ -0.42
PTPRU-210ENST00000527027 IGHV4OR15-8A0A075B7B6 117 aa12.42□□□□□ -0.42
PTPRU-210ENST00000527027 A0A087WW49 117 aa12.42□□□□□ -0.42
PTPRU-210ENST00000527027 SOX15O60248 233 aa12.42□□□□□ -0.42
PTPRU-210ENST00000527027 CA11O75493 328 aa12.42□□□□□ -0.42
PTPRU-210ENST00000527027 LGALS1P09382 135 aaKnown RBP12.42□□□□□ -0.42
PTPRU-210ENST00000527027 OR8U9P0C7N5 309 aa12.42□□□□□ -0.42
PTPRU-210ENST00000527027 IGFBP3P17936 291 aaPredicted RBP12.42□□□□□ -0.42
PTPRU-210ENST00000527027 C19orf54Q5BKX5 351 aa12.42□□□□□ -0.42
PTPRU-210ENST00000527027 ZNF660Q6AZW8 331 aaPredicted RBP12.42□□□□□ -0.42
PTPRU-210ENST00000527027 ODF3L1Q8IXM7 274 aa12.42□□□□□ -0.42
PTPRU-210ENST00000527027 OR52L2PQ8NGH6 319 aa12.42□□□□□ -0.42
PTPRU-210ENST00000527027 ABHD14AQ9BUJ0 271 aa12.42□□□□□ -0.42
PTPRU-210ENST00000527027 MRPL20Q9BYC9 149 aaKnown RBP12.42□□□□□ -0.42
PTPRU-210ENST00000527027 CST11Q9H112 138 aa12.42□□□□□ -0.42
PTPRU-210ENST00000527027 KIAA1456Q9P272 454 aa12.42□□□□□ -0.42
PTPRU-210ENST00000527027 A0A1W2PN81 502 aa12.41□□□□□ -0.42
PTPRU-210ENST00000527027 GPX5O75715 221 aa12.41□□□□□ -0.42
PTPRU-210ENST00000527027 NDUFA3O95167 84 aa12.41□□□□□ -0.42
PTPRU-210ENST00000527027 GLAP06280 429 aa12.41□□□□□ -0.42
PTPRU-210ENST00000527027 CHRNA7P36544 502 aa12.41□□□□□ -0.42
PTPRU-210ENST00000527027 CRIP2P52943 208 aaPredicted RBP12.41□□□□□ -0.42
PTPRU-210ENST00000527027 GNMTQ14749 295 aa12.41□□□□□ -0.42
PTPRU-210ENST00000527027 SRSF7Q16629 238 aaKnown RBP eCLIP12.41□□□□□ -0.42
PTPRU-210ENST00000527027 ECSCRQ19T08 205 aa12.41□□□□□ -0.42
PTPRU-210ENST00000527027 ZNF554Q86TJ5 538 aa12.41□□□□□ -0.42
PTPRU-210ENST00000527027 Q8N1Y9 231 aa12.41□□□□□ -0.42
PTPRU-210ENST00000527027 ISOC1Q96CN7 298 aa12.41□□□□□ -0.42
PTPRU-210ENST00000527027 EDA2RQ9HAV5 297 aa12.41□□□□□ -0.42
PTPRU-210ENST00000527027 FGF20Q9NP95 211 aaPredicted RBP12.41□□□□□ -0.42
PTPRU-210ENST00000527027 MBNL3Q9NUK0 354 aaKnown RBP12.41□□□□□ -0.42
PTPRU-210ENST00000527027 KCNIP1Q9NZI2 227 aa12.41□□□□□ -0.42
PTPRU-210ENST00000527027 FOXA2Q9Y261 457 aaPredicted RBP12.41□□□□□ -0.42
PTPRU-210ENST00000527027 FBXO7Q9Y3I1 522 aa12.41□□□□□ -0.42
PTPRU-210ENST00000527027 OGG1O15527 345 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 SC5DO75845 299 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 IGHV4-30-4P0DP06 118 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 FUT3P21217 361 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 PPP1CCP36873 323 aaKnown RBP12.4□□□□□ -0.42
PTPRU-210ENST00000527027 HTD2P86397 168 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 PITPNAQ00169 270 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 NDPQ00604 133 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 TMEM267Q0VDI3 215 aaPredicted RBP12.4□□□□□ -0.42
PTPRU-210ENST00000527027 GLIPR1L1Q6UWM5 242 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 TMPRSS11AQ6ZMR5 421 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 ZNF833PQ6ZTB9 187 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 TCTEX1D1Q8N7M0 179 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 CASTOR1Q8WTX7 329 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 MUL1Q969V5 352 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 FLYWCH2Q96CP2 140 aaKnown RBP12.4□□□□□ -0.42
PTPRU-210ENST00000527027 BABAM2Q9NXR7 383 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 CKLFQ9UBR5 152 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 JPT1Q9UK76 154 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 NUBP2Q9Y5Y2 271 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 STARD9Q9P2P6 4700 aa12.4□□□□□ -0.42
PTPRU-210ENST00000527027 UBE2QL1A1L167 161 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 FAM90A7PA6NKC0 464 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 FAM90A23PA8MXZ1 464 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 A8MZ25 164 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 YPEL1O60688 119 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 HSPB1P04792 205 aaKnown RBP12.39□□□□□ -0.43
PTPRU-210ENST00000527027 OR3A3P47888 321 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 ETV1P50549 477 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 CX3CL1P78423 397 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 LY6G6FQ5SQ64 297 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 OR2G6Q5TZ20 316 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 C5orf24Q7Z6I8 188 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 OR13C5Q8NGS8 318 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 SMIM19Q96E16 107 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 YPEL2Q96QA6 119 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 SELENOIQ9C0D9 397 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 BANF2Q9H503 90 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 C19orf73Q9NVV2 129 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 A3GALT2U3KPV4 340 aa12.39□□□□□ -0.43
PTPRU-210ENST00000527027 TRAV8-7A0A075B6U6 113 aa12.38□□□□□ -0.43
PTPRU-210ENST00000527027 TRBV5-5A0A0J9YX44 114 aa12.38□□□□□ -0.43
PTPRU-210ENST00000527027 IRGMA1A4Y4 181 aa12.38□□□□□ -0.43
PTPRU-210ENST00000527027 ARPC1BO15143 372 aaKnown RBP12.38□□□□□ -0.43
PTPRU-210ENST00000527027 DENRO43583 198 aaKnown RBP12.38□□□□□ -0.43
PTPRU-210ENST00000527027 RGS11O94810 467 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms