RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 UBE2ZQ9H832 354 aaPredicted RBP6.79□□□□□ -1.32
BDNF-213ENST00000525950 CHODLQ9H9P2 273 aa6.79□□□□□ -1.32
BDNF-213ENST00000525950 GAB2Q9UQC2 676 aa6.79□□□□□ -1.32
BDNF-213ENST00000525950 MRPS17Q9Y2R5 130 aaKnown RBP6.79□□□□□ -1.32
BDNF-213ENST00000525950 MPC1Q9Y5U8 109 aa6.79□□□□□ -1.32
BDNF-213ENST00000525950 USP34Q70CQ2 3546 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 TRAV24A0A0B4J272 114 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 CCDC163A0A0D9SF12 145 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 RNF212BA8MTL3 300 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 CXCL13O43927 109 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 GPM6AP51674 278 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 SLC38A11Q08AI6 406 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 MSMO1Q15800 293 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 ZNF468Q5VIY5 522 aaPredicted RBP6.78□□□□□ -1.32
BDNF-213ENST00000525950 C20orf204Q6ZNR8 217 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 ZNF573Q86YE8 665 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 OR2T10Q8NGZ9 312 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 NEK7Q8TDX7 302 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 MED12Q93074 2177 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 KLF7O75840 302 aaPredicted RBP6.78□□□□□ -1.32
BDNF-213ENST00000525950 NXPH3O95157 252 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 CD55P08174 381 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 TESK1Q15569 626 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 VWC2Q2TAL6 325 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 MRPL21Q7Z2W9 205 aaKnown RBP6.78□□□□□ -1.32
BDNF-213ENST00000525950 OR51H1Q8NH63 302 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 OR10D3Q8NH80 312 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 OR5P3Q8WZ94 311 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 PARLQ9H300 379 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 AKIRIN1Q9H9L7 192 aaPredicted RBP6.78□□□□□ -1.32
BDNF-213ENST00000525950 PRDM6Q9NQX0 595 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 DLL3Q9NYJ7 618 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 HSPB7Q9UBY9 170 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 XIRP2A4UGR9 3374 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 TMPRSS2O15393 492 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 SERPINA7P05543 415 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 P0C879 139 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 EPHA8P29322 1005 aaPredicted RBP6.78□□□□□ -1.32
BDNF-213ENST00000525950 KCNIP4Q6PIL6 250 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 DIRC2Q96SL1 478 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 TMEM147Q9BVK8 224 aa6.78□□□□□ -1.32
BDNF-213ENST00000525950 ASCC3Q8N3C0 2202 aaKnown RBP6.78□□□□□ -1.32
BDNF-213ENST00000525950 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 MLNRO43193 412 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 IGKV1D-33P01593 117 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 IGKV1-33P01594 117 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 IGHEP01854 428 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 P04436 131 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 IAPPP10997 89 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 MDKP21741 143 aaPredicted RBP6.77□□□□□ -1.33
BDNF-213ENST00000525950 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.77□□□□□ -1.33
BDNF-213ENST00000525950 FAM58AQ8N1B3 248 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 GBGT1Q8N5D6 347 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 MYO9BQ13459 2157 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 LRRC3CA6NJW4 275 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 TCAPO15273 167 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 ZNF16P17020 682 aaPredicted RBP6.77□□□□□ -1.33
BDNF-213ENST00000525950 ERVFC1-1P60608 527 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 GNG3P63215 75 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 TNFRSF9Q07011 255 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 C1orf194Q5T5A4 169 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 Q6P435 159 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 YRDCQ86U90 279 aaKnown RBP6.77□□□□□ -1.33
BDNF-213ENST00000525950 TCTEX1D1Q8N7M0 179 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 OR2Y1Q8NGV0 311 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 NEIL1Q96FI4 390 aaPredicted RBP6.77□□□□□ -1.33
BDNF-213ENST00000525950 OCIAD1Q9NX40 245 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 IL36RNQ9UBH0 155 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 WIPI2Q9Y4P8 454 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 PMS2P5A8MQ11 134 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 GYPAP02724 150 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 FOXL1Q12952 345 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 TMEM144Q7Z5S9 345 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 TXNDC17Q9BRA2 123 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 PCGF1Q9BSM1 259 aa6.77□□□□□ -1.33
BDNF-213ENST00000525950 MBNL3Q9NUK0 354 aaKnown RBP6.77□□□□□ -1.33
BDNF-213ENST00000525950 KIR2DL5BA0A0G2JN68 375 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 KIR2DL5BA0A0G2JPC4 375 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 SLC33A1O00400 549 aaPredicted RBP6.76□□□□□ -1.33
BDNF-213ENST00000525950 SYNGR1O43759 233 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 WISP2O76076 250 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 COX5AP20674 150 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 ARR3P36575 388 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 CNN1P51911 297 aaKnown RBP6.76□□□□□ -1.33
BDNF-213ENST00000525950 GFRA1P56159 465 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 RPL15P61313 204 aaKnown RBP6.76□□□□□ -1.33
BDNF-213ENST00000525950 ERVS71-1P61550 626 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 TRA2AQ13595 282 aaKnown RBP eCLIP6.76□□□□□ -1.33
BDNF-213ENST00000525950 P2RY6Q15077 328 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 SPANXN5Q5MJ07 72 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 ACSM6Q6P461 480 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 BTNL3Q6UXE8 466 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 ZNF497Q6ZNH5 498 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 KIR2DL5AQ8N109 375 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 FGFRL1Q8N441 504 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 RAB1CQ92928 201 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 PPP1R14DQ9NXH3 145 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 CRIM1Q9NZV1 1036 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 PDE6DO43924 150 aa6.76□□□□□ -1.33
BDNF-213ENST00000525950 IDH3GP51553 393 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms