RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 TALDO1P37837 337 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 ETV1P50549 477 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 FABP6P51161 128 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 XKP51811 444 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 KRTAP10-8P60410 259 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 DSTNP60981 165 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 HBA1P69905 142 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 CDK5Q00535 292 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 RBMY1FQ15415 496 aaKnown RBP3.71□□□□□ -1.82
SKP1-213ENST00000524288 ORMDL2Q53FV1 153 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 PYDC2Q56P42 97 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 CLLU1Q5K131 121 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 TRIQKQ629K1 86 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 CASP12Q6UXS9 341 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 LINC01551Q86U37 167 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 NOXO1Q8NFA2 376 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 GPR32P1Q8NGA4 272 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 OR52N1Q8NH53 320 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 PIFOQ8TCI5 191 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 MAL2Q969L2 176 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 RBMXL1Q96E39 390 aaKnown RBP3.71□□□□□ -1.82
SKP1-213ENST00000524288 SEH1LQ96EE3 360 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 DIRAS2Q96HU8 199 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 SCGB3A2Q96PL1 93 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 OR4K3Q96R72 315 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 TIMM17AQ99595 171 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 EFCAB11Q9BUY7 163 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 BBS2Q9BXC9 721 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 PARP12Q9H0J9 701 aaKnown RBP3.71□□□□□ -1.82
SKP1-213ENST00000524288 EXOSC4Q9NPD3 245 aaKnown RBP3.71□□□□□ -1.82
SKP1-213ENST00000524288 TAS2R7Q9NYW3 318 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 GLTPQ9NZD2 209 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 DNAJC27Q9NZQ0 273 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 CLEC2DQ9UHP7 191 aa3.71□□□□□ -1.82
SKP1-213ENST00000524288 MEIKINA0A087WXM9 373 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 A0A1W2PPV4 95 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 SLC5A10A0PJK1 596 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 MGAT4DA6NG13 374 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 INMT-MINDY4F8WBC2 141 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 J3QRE1 110 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 SNAPC5O75971 98 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 CSTAP01040 98 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 CATP04040 527 aaKnown RBP3.7□□□□□ -1.82
SKP1-213ENST00000524288 LIMS3P0CW19 117 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 LIMS4P0CW20 117 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 IMPA1P29218 277 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 EVI2BP34910 448 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 CSKP41240 450 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 CRATP43155 626 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 OR1E2P47887 323 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 SPINT3P49223 89 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 TUFMP49411 452 aaKnown RBP3.7□□□□□ -1.82
SKP1-213ENST00000524288 PRLHRP49683 370 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 ZNF121P58317 390 aaPredicted RBP3.7□□□□□ -1.82
SKP1-213ENST00000524288 RPS25P62851 125 aaKnown RBP3.7□□□□□ -1.82
SKP1-213ENST00000524288 ARG2P78540 354 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 DEFB103AP81534 67 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 FABP5Q01469 135 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 HBMQ6B0K9 141 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 MED27Q6P2C8 311 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 Q6P435 159 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 AGTRAPQ6RW13 159 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 TMEM205Q6UW68 189 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 TEX261Q6UWH6 196 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 COMMD6Q7Z4G1 85 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 LRRC28Q86X40 367 aaPredicted RBP3.7□□□□□ -1.82
SKP1-213ENST00000524288 NKAIN4Q8IVV8 208 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 Q8N402 240 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 MORN4Q8NDC4 146 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 ATP6V1C2Q8NEY4 427 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 OR52P1PQ8NH57 321 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 LHFPL5Q8TAF8 219 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 LRRC20Q8TCA0 184 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 WFDC5Q8TCV5 224 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 SFXN5Q8TD22 340 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 HAVCR2Q8TDQ0 301 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 C16orf78Q8WTQ4 265 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 OR5P2Q8WZ92 322 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 RGP1Q92546 391 aaPredicted RBP3.7□□□□□ -1.82
SKP1-213ENST00000524288 FAM104AQ969W3 186 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 EXOSC8Q96B26 276 aaKnown RBP3.7□□□□□ -1.82
SKP1-213ENST00000524288 PPCDCQ96CD2 204 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 SGTBQ96EQ0 304 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 LINC00167Q96N53 147 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 ZNF649Q9BS31 505 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 RSPO3Q9BXY4 272 aaPredicted RBP3.7□□□□□ -1.82
SKP1-213ENST00000524288 PRRG3Q9BZD7 231 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 TRIM45Q9H8W5 580 aaPredicted RBP3.7□□□□□ -1.82
SKP1-213ENST00000524288 BCL2L10Q9HD36 194 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 MYOZ1Q9NP98 299 aaPredicted RBP3.7□□□□□ -1.82
SKP1-213ENST00000524288 COPZ2Q9P299 210 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 SLC22A14Q9Y267 594 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 HS3ST2Q9Y278 367 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 NUBP2Q9Y5Y2 271 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 U3KQ87 197 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 MYO10Q9HD67 2058 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 MYOFQ9NZM1 2061 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 GOLGB1Q14789 3259 aaKnown RBP3.7□□□□□ -1.82
SKP1-213ENST00000524288 SRCAPQ6ZRS2 3230 aa3.7□□□□□ -1.82
SKP1-213ENST00000524288 SNRNP200O75643 2136 aaKnown RBP3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms