RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 KCTD14Q9BQ13 255 aaPredicted RBP6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 MOB1AQ9H8S9 216 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 IKZF2Q9UKS7 526 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 DMRT1Q9Y5R6 373 aa6.49□□□□□ -1.37
TRAPPC9-212ENST00000521944 MAGEB3O15480 346 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 KRT36O76013 467 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 APOL3O95236 402 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 FCGR2BP31994 310 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 TATDN3Q17R31 274 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 ZNF562Q6V9R5 426 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 SSX6Q7RTT6 188 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 PRSS35Q8N3Z0 413 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 OR10V1Q8NGI7 309 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 ABHD5Q8WTS1 349 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 CCDC107Q8WV48 283 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 CACNG8Q8WXS5 425 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 NR1H4Q96RI1 486 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 GORASP2Q9H8Y8 452 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 RHOFQ9HBH0 211 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 ZNF355PQ9NSJ1 428 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 ABCD2Q9UBJ2 740 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 PEMTQ9UBM1 199 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 RNF150Q9ULK6 438 aa6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 TMA7Q9Y2S6 64 aaKnown RBP6.48□□□□□ -1.37
TRAPPC9-212ENST00000521944 VPS13BQ7Z7G8 4022 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 A0A0G2JLM5 398 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 TNFRSF11BO00300 401 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 UBE2CO00762 179 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 DEFB4AO15263 64 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 RPP14O95059 124 aaKnown RBP6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 CCNB2O95067 398 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 SERPINA3P01011 423 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 FABP3P05413 133 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 OR3A3P47888 321 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 APOC4P55056 127 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 LINC00205P59089 165 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 CXCR4P61073 352 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 RPS7P62081 194 aaKnown RBP6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 GINS1Q14691 196 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 ELP2Q6IA86 826 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 UTS2BQ765I0 119 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 KCTD20Q7Z5Y7 419 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 C5orf24Q7Z6I8 188 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 SAXO1Q8IYX7 474 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 TCEANCQ8N8B7 351 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 OR52B4Q8NGK2 314 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 OR10AC1Q8NH08 325 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 DYNLRB2Q8TF09 96 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 PP6455Q8WZ26 134 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 OPALINQ96PE5 141 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 CLCC1Q96S66 551 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 MFFQ9GZY8 342 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 TMBIM4Q9HC24 238 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 FAM118AQ9NWS6 357 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 TECRQ9NZ01 308 aaKnown RBP6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 MLXQ9UH92 298 aa6.47□□□□□ -1.37
TRAPPC9-212ENST00000521944 IGHV4-4A0A075B6R2 117 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 KIR2DL5BA0A0G2JN68 375 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 KIR2DL5BA0A0G2JPC4 375 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 H3BUA1 57 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 ORC5O43913 435 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 SCAF4O95104 1147 aaKnown RBP6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 S1PR2O95136 353 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 MT-ND4P03905 459 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 RBMY1A1P0DJD3 496 aaKnown RBP6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 PRKACBP22694 351 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 CD40LGP29965 261 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 ADARB1P78563 741 aaKnown RBP6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 MAPRE2Q15555 327 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 PIGYQ3MUY2 71 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 ZNF833PQ6ZTB9 187 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 CROCCP2Q86T23 111 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 KIR2DL5AQ8N109 375 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 SUMF2Q8NBJ7 301 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 OR1L1Q8NH94 360 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 KIR2DL5BQ8NHK3 375 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 TEX47Q8TBZ9 253 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 SNAPC3Q92966 411 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 SPSB1Q96BD6 273 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 FGGYQ96C11 551 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 C10orf35Q96D05 121 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 CYYR1Q96J86 154 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 C16orf92Q96LL3 132 aa6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 HOPXQ9BPY8 73 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 DPCDQ9BVM2 203 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 TINAGL1Q9GZM7 467 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 C11orf68Q9H3H3 251 aaKnown RBP6.46□□□□□ -1.38
TRAPPC9-212ENST00000521944 LOC107986453A0A1B0GWG9 222 aa6.45□□□□□ -1.38
TRAPPC9-212ENST00000521944 EPM2AB3EWF7 344 aa6.45□□□□□ -1.38
TRAPPC9-212ENST00000521944 EDF1O60869 148 aaKnown RBP6.45□□□□□ -1.38
TRAPPC9-212ENST00000521944 CA2P00918 260 aa6.45□□□□□ -1.38
TRAPPC9-212ENST00000521944 HLA-AP01891 365 aaKnown RBP6.45□□□□□ -1.38
TRAPPC9-212ENST00000521944 MT-ND2P03891 347 aa6.45□□□□□ -1.38
TRAPPC9-212ENST00000521944 CBLN1P23435 193 aa6.45□□□□□ -1.38
TRAPPC9-212ENST00000521944 KCNJ3P48549 501 aa6.45□□□□□ -1.38
TRAPPC9-212ENST00000521944 CDK5Q00535 292 aa6.45□□□□□ -1.38
TRAPPC9-212ENST00000521944 GNMTQ14749 295 aa6.45□□□□□ -1.38
TRAPPC9-212ENST00000521944 C21orf62-AS1Q17RA5 79 aa6.45□□□□□ -1.38
TRAPPC9-212ENST00000521944 MICAQ29983 383 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms