RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 IL3P08700 152 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 NKX2-5P52952 324 aaPredicted RBP1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 LINC00313P59037 77 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 GABARAPL2P60520 117 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 CXCR4P61073 352 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 FABP5Q01469 135 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 IL15RAQ13261 267 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 ZNF660Q6AZW8 331 aaPredicted RBP1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 Q8NAQ8 132 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 GPR32P1Q8NGA4 272 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 OR1P1Q8NH06 330 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 CD200R1Q8TD46 325 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 RAB8BQ92930 207 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 RBPMSQ93062 196 aaKnown RBP1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 OPTNQ96CV9 577 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 PARD6GQ9BYG4 376 aaPredicted RBP1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 DERL2Q9GZP9 239 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 HRASLSQ9HDD0 168 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 UBAP1Q9NZ09 502 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 ZNF230Q9UIE0 474 aaPredicted RBP1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 POLR1DQ9Y2S0 133 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 MRPS16Q9Y3D3 137 aaKnown RBP1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 FIS1Q9Y3D6 152 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 POLR3HQ9Y535 204 aaPredicted RBP1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 PHLDA3Q9Y5J5 127 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 SEC16AO15027 2179 aa1.76□□□□□ -2.13
RNU6-840P-201ENST00000517275 NID2Q14112 1375 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 SMIM23A6NLE4 172 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 B4DEV8 164 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 M0R036 132 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 TGOLN2O43493 480 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 CPSF4O95639 269 aaKnown RBP1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 KRT75O95678 551 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 IFNA5P01569 189 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 IGHMP01871 453 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 NQO1P15559 274 aaKnown RBP1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 HOXA6P31267 233 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 AKR1C2P52895 323 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 KLF3P57682 345 aaPredicted RBP1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 DYNLL1P63167 89 aaKnown RBP1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 HPCAP84074 193 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 TMEM267Q0VDI3 215 aaPredicted RBP1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 PDK2Q15119 407 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 PDGFRLQ15198 375 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 MAPK14Q16539 360 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 LRP11Q86VZ4 500 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 ZNF561Q8N587 486 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 NATD1Q8N6N6 113 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 OR2V1Q8NHB1 315 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 TMBIM1Q969X1 311 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 CPNE2Q96FN4 548 aaPredicted RBP1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 ABHD14BQ96IU4 210 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 EBNA1BP2Q99848 306 aaKnown RBP1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 TM2D3Q9BRN9 247 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 SLC23A2Q9UGH3 650 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 OR51B4Q9Y5P0 310 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 THADAQ6YHU6 1953 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 SCN4AP35499 1836 aa1.75□□□□□ -2.13
RNU6-840P-201ENST00000517275 NUP205Q92621 2012 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 SHROOM3Q8TF72 1996 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 TICRRQ7Z2Z1 1910 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 TRAV8-1A0A0A6YYK1 113 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 GGTLC3B5MD39 225 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 DEDDO75618 318 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 STK16O75716 305 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 IL6P05231 212 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 HRES1P13985 223 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 MYL12AP19105 171 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 CXCL3P19876 107 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 RPL12P30050 165 aaKnown RBP1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 BLVRAP53004 296 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 KRTAP25-1Q3LHN0 102 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 CLVS2Q5SYC1 327 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 WDR59Q6PJI9 974 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 LYPD6Q86Y78 171 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 TMEM161BQ8NDZ6 487 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 OR11G2Q8NGC1 345 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 OR8K1Q8NGG5 319 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 MUC7Q8TAX7 377 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 ZNF721Q8TF20 911 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 TIPINQ9BVW5 301 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 BCL2L14Q9BZR8 327 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 NKX6-2Q9C056 277 aaPredicted RBP1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 MED28Q9H204 178 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 ABCG5Q9H222 651 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 KCNIP2Q9NS61 270 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 C3orf18Q9UK00 162 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 GPR179Q6PRD1 2367 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 SPATA31E1Q6ZUB1 1445 aa1.74□□□□□ -2.13
RNU6-840P-201ENST00000517275 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.73□□□□□ -2.13
RNU6-840P-201ENST00000517275 A0A0B4J2C4 111 aa1.73□□□□□ -2.13
RNU6-840P-201ENST00000517275 C5orf49A4QMS7 147 aa1.73□□□□□ -2.13
RNU6-840P-201ENST00000517275 MT-CO2P00403 227 aa1.73□□□□□ -2.13
RNU6-840P-201ENST00000517275 CD7P09564 240 aa1.73□□□□□ -2.13
RNU6-840P-201ENST00000517275 OR13C7P0DN81 318 aa1.73□□□□□ -2.13
RNU6-840P-201ENST00000517275 OR12D1P0DN82 309 aa1.73□□□□□ -2.13
RNU6-840P-201ENST00000517275 RNASE2P10153 161 aaKnown RBP1.73□□□□□ -2.13
RNU6-840P-201ENST00000517275 ZNF708P17019 499 aa1.73□□□□□ -2.13
RNU6-840P-201ENST00000517275 CXCL2P19875 107 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms