RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 CENPBD1B2RD01 187 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 D6RAR5 112 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 LRRN3E7EW58 273 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 NDUFC2-KCTD14E9PQ53 114 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 H0Y980 276 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 M0QYV0 167 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 M0R036 132 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 BPY2O14599 106 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 CHST10O43529 356 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 KLRC4O43908 158 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 EIF1BO60739 113 aaKnown RBP2.02□□□□□ -2.09
HERC4-215ENST00000515753 GCM2O75603 506 aaPredicted RBP2.02□□□□□ -2.09
HERC4-215ENST00000515753 SERPINB7O75635 380 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 ATP5HO75947 161 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 IGLV3-25P01717 112 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 SNRPAP09012 282 aaKnown RBP2.02□□□□□ -2.09
HERC4-215ENST00000515753 CECR9P0C854 216 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 SLC2A1P11166 492 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 NQO1P15559 274 aaKnown RBP2.02□□□□□ -2.09
HERC4-215ENST00000515753 ZNF17P17021 662 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 MAGP20916 626 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 ELK4P28324 431 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 EIF1P41567 113 aaKnown RBP2.02□□□□□ -2.09
HERC4-215ENST00000515753 CDKN2CP42773 168 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 LHX2P50458 406 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 PFN3P60673 137 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 MLLT11Q13015 90 aaPredicted RBP2.02□□□□□ -2.09
HERC4-215ENST00000515753 MADCAM1Q13477 382 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 GNA13Q14344 377 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 ZNF404Q494X3 552 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 Q499Y3 187 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 MPV17L2Q567V2 206 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 LPCAT4Q643R3 524 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 Q6P435 159 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 GUSBP11Q6P575 273 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 TMEM205Q6UW68 189 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 ENTHD1Q8IYW4 607 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 C15orf56Q8N910 161 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 Q8N976 141 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 Q8N9L7 120 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 Q8N9W7 124 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 TMEM35BQ8NCS4 154 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 OR4M2Q8NGB6 313 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 OR4M1Q8NGD0 313 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 ZNF420Q8TAQ5 688 aaPredicted RBP2.02□□□□□ -2.09
HERC4-215ENST00000515753 PIGXQ8TBF5 258 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 C22orf15Q8WYQ4 148 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 TMEM158Q8WZ71 300 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 GHSRQ92847 366 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 PPP1R14BQ96C90 147 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 PACRGQ96M98 296 aaPredicted RBP2.02□□□□□ -2.09
HERC4-215ENST00000515753 KCTD7Q96MP8 289 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 TAPBPLQ9BX59 468 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 MRPL20Q9BYC9 149 aaKnown RBP2.02□□□□□ -2.09
HERC4-215ENST00000515753 PARD6GQ9BYG4 376 aaPredicted RBP2.02□□□□□ -2.09
HERC4-215ENST00000515753 ARL6Q9H0F7 186 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 METTL9Q9H1A3 318 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 OR52D1Q9H346 318 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 TPK1Q9H3S4 243 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 PLEKHF2Q9H8W4 249 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 TAS2R13Q9NYV9 303 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 EMC3Q9P0I2 261 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 TP53TG1Q9Y2A0 90 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 TBL2Q9Y4P3 447 aaKnown RBP2.02□□□□□ -2.09
HERC4-215ENST00000515753 KIAA1671Q9BY89 1806 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 EP300Q09472 2414 aaPredicted RBP2.02□□□□□ -2.09
HERC4-215ENST00000515753 TRANK1O15050 2925 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 DYSFO75923 2080 aa2.02□□□□□ -2.09
HERC4-215ENST00000515753 NCOR2Q9Y618 2525 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 TRAV8-2A0A0B4J237 113 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 DAPL1A0PJW8 107 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 PGPA6NDG6 321 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 OR5K4A6NMS3 321 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 F5H768 121 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 GPR171O14626 319 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 PFDN6O15212 129 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 BIRC5O15392 142 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 PDCD6O75340 191 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 ZNF688P0C7X2 276 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 UGT2B7P16662 529 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 ZNF32P17041 273 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 IL3RAP26951 378 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 HSPA9P38646 679 aaKnown RBP2.01□□□□□ -2.09
HERC4-215ENST00000515753 CD79BP40259 229 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 NKX2-5P52952 324 aaPredicted RBP2.01□□□□□ -2.09
HERC4-215ENST00000515753 GRB2P62993 217 aaKnown RBP2.01□□□□□ -2.09
HERC4-215ENST00000515753 GNA12Q03113 381 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 STX5Q13190 355 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 MPPED2Q15777 294 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 HLA-DRB5Q30154 266 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 DEFB133Q30KQ1 61 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 LINC00303Q3SY05 128 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 ZCWPW2Q504Y3 356 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 SMUG1Q53HV7 270 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 ACTBL2Q562R1 376 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 SYPL2Q5VXT5 272 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 FAM173BQ6P4H8 233 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 C22orf39Q6P5X5 142 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 DGAT2L6Q6ZPD8 337 aa2.01□□□□□ -2.09
HERC4-215ENST00000515753 FAM231DQ6ZW35 169 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms