RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 AHSA1O95433 338 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 NAPSAO96009 420 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 GCGP01275 180 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 IFNA17P01571 189 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 AKR1C4P17516 323 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 CHRNB4P30926 498 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 FMODQ06828 376 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 PDCD1Q15116 288 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 ELOA3BQ3SY89 546 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 C1orf194Q5T5A4 169 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 ZNF614Q8N883 585 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 ELOA3Q8NG57 546 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 C11orf40Q8WZ69 217 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 SLAMF6Q96DU3 332 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 GMPPAQ96IJ6 420 aaPredicted RBP6.27□□□□□ -1.41
CLIP1-205ENST00000514271 IMMP2LQ96T52 175 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 ALKBH4Q9NXW9 302 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 ANXA10Q9UJ72 324 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 TMED7-TICAM2A0A0A6YYA0 188 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 A0A0G2JMM0 328 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 A0A1W2PPB8 328 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 A0A1W2PRS3 328 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 METTL21EPA6NDL7 271 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 KIR3DP1A8MWS1 328 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 SCGB2A1O75556 95 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 TRGC2P03986 189 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 RTL6Q6ICC9 239 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 FBXW12Q6X9E4 464 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 SEMA6DQ8NFY4 1073 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 CFHR4Q92496 578 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 RND1Q92730 232 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 SPSB4Q96A44 273 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 TMEM45BQ96B21 275 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 FGF23Q9GZV9 251 aaPredicted RBP6.27□□□□□ -1.41
CLIP1-205ENST00000514271 PITPNC1Q9UKF7 332 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 NCOR2Q9Y618 2525 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 IGKV3D-15A0A087WSY6 115 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 IGKV1-12A0A0C4DH73 117 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 A6NIZ1 184 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 TRDCB7Z8K6 153 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.27□□□□□ -1.41
CLIP1-205ENST00000514271 SLC16A7O60669 478 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 KNG1P01042 644 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 IGKV1D-12P01611 117 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 IL6RP08887 468 aaPredicted RBP6.27□□□□□ -1.41
CLIP1-205ENST00000514271 TNFRSF1AP19438 455 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 ZNF93P35789 620 aaPredicted RBP6.27□□□□□ -1.41
CLIP1-205ENST00000514271 RAP1BP61224 184 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 RBX1P62877 108 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 SUMO1P63165 101 aaKnown RBP6.27□□□□□ -1.41
CLIP1-205ENST00000514271 ADAM8P78325 824 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 PNRC1Q12796 327 aaPredicted RBP6.27□□□□□ -1.41
CLIP1-205ENST00000514271 ATXN7L3Q14CW9 347 aaPredicted RBP6.27□□□□□ -1.41
CLIP1-205ENST00000514271 HERPUD1Q15011 391 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 OR8G1Q15617 311 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 SCGB2B2Q4G0G5 96 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 SPATA46Q5T0L3 261 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 TMEM123Q8N131 208 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 DAZAP1Q96EP5 407 aaKnown RBP6.27□□□□□ -1.41
CLIP1-205ENST00000514271 TP53RKQ96S44 253 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 C20orf144Q9BQM9 153 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 PSMG3Q9BT73 122 aaPredicted RBP6.27□□□□□ -1.41
CLIP1-205ENST00000514271 DEFB127Q9H1M4 99 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 ELOVL5Q9NYP7 299 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 SPRR3Q9UBC9 169 aa6.27□□□□□ -1.41
CLIP1-205ENST00000514271 ERRFI1Q9UJM3 462 aaPredicted RBP6.27□□□□□ -1.41
CLIP1-205ENST00000514271 DMXL1Q9Y485 3027 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 WDFY4Q6ZS81 3184 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 BSNQ9UPA5 3926 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 TMEM238C9JI98 176 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 NXPH2O95156 264 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 SNRPCP09234 159 aaKnown RBP6.26□□□□□ -1.41
CLIP1-205ENST00000514271 CTXN2P0C2S0 81 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 PDLIM3Q53GG5 364 aaPredicted RBP6.26□□□□□ -1.41
CLIP1-205ENST00000514271 WIPI1Q5MNZ9 446 aaPredicted RBP6.26□□□□□ -1.41
CLIP1-205ENST00000514271 OTPQ5XKR4 325 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 P4HA3Q7Z4N8 544 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 OR2AJ1Q8NGZ0 328 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 NEIL1Q96FI4 390 aaPredicted RBP6.26□□□□□ -1.41
CLIP1-205ENST00000514271 CPNE2Q96FN4 548 aaPredicted RBP6.26□□□□□ -1.41
CLIP1-205ENST00000514271 C5orf30Q96GV9 206 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 ZNF48Q96MX3 618 aaPredicted RBP6.26□□□□□ -1.41
CLIP1-205ENST00000514271 CTDSP1Q9GZU7 261 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 TMEM222Q9H0R3 208 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 FCN1O00602 326 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 KLK2P20151 261 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 ATP6V0CP27449 155 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 ASCL1P50553 236 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 BAXQ07812 192 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 CHRFAM7AQ494W8 412 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 TEX38Q6PEX7 206 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 GLIPR1L1Q6UWM5 242 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 COLCA1Q6ZS62 124 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 DOLPP1Q86YN1 238 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 GBGT1Q8N5D6 347 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 ACY3Q96HD9 319 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 SCGB3A2Q96PL1 93 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 HINT2Q9BX68 163 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 GAL3ST2Q9H3Q3 398 aa6.26□□□□□ -1.41
CLIP1-205ENST00000514271 METTL8Q9H825 291 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms