RNA–Protein interactions for RNA: ENST00000514189.5

PRDM16-208, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRDM16, Length 4,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-208ENST00000514189 OR1L4Q8NGR5 311 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 PPP1R14DQ9NXH3 145 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 ZNF107Q9UII5 783 aaPredicted RBP11.27□□□□□ -0.61
PRDM16-208ENST00000514189 MED13Q9UHV7 2174 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 SEC14L6B5MCN3 397 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 ATXN7O15265 892 aaPredicted RBP11.27□□□□□ -0.61
PRDM16-208ENST00000514189 LYPD3O95274 346 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 CELA3AP09093 270 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 CCL8P80075 99 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 DPPA3Q6W0C5 159 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 LINC00518Q8N0U6 118 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 ADAMTS17Q8TE56 1095 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 SF3B5Q9BWJ5 86 aaKnown RBP11.27□□□□□ -0.61
PRDM16-208ENST00000514189 PCED1AQ9H1Q7 454 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 TECRQ9NZ01 308 aaKnown RBP11.27□□□□□ -0.61
PRDM16-208ENST00000514189 CACFD1Q9UGQ2 172 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 IL17BQ9UHF5 180 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 LOC105371267A0A1B0GV96 52 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 H0YIZ8 118 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 FAM157CP0CG43 387 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 MRPS11P82912 194 aaKnown RBP11.27□□□□□ -0.61
PRDM16-208ENST00000514189 NAAAQ02083 359 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 LY6G6FQ5SQ64 297 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 VKORC1L1Q8N0U8 176 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 TMEM251Q8N6I4 163 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 OR4C12Q96R67 309 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 VAMP8Q9BV40 100 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 Q9N2K0 584 aa11.27□□□□□ -0.61
PRDM16-208ENST00000514189 SCN8AQ9UQD0 1980 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 ZNF253O75346 499 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 FNDC7Q5VTL7 733 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 LRRC75AQ8NAA5 344 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 OR1L1Q8NH94 360 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 C2CD3Q4AC94 2353 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 TRAV17A0A0B4J275 112 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 FAM209BQ5JX69 171 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 TMEM230Q96A57 120 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 CDX2Q99626 313 aaPredicted RBP11.26□□□□□ -0.61
PRDM16-208ENST00000514189 TMEM147Q9BVK8 224 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 BARX1Q9HBU1 254 aaPredicted RBP11.26□□□□□ -0.61
PRDM16-208ENST00000514189 VAX2Q9UIW0 290 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 VWA8A3KMH1 1905 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 PTPRDP23468 1912 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 A0A0U1RQV5 110 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 J3QT63 122 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 IER3P46695 156 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 GNG4P50150 75 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 SLC35E3Q7Z769 313 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 Q8IYB0 196 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 OR5A2Q8NGI9 324 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 SGMS2Q8NHU3 365 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 GPR146Q96CH1 333 aa11.26□□□□□ -0.61
PRDM16-208ENST00000514189 IGHV3-72A0A0B4J1Y9 119 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 SCGB2A1O75556 95 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 NDUFB4O95168 129 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 CT45A10P0DMU9 189 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 WNT5AP41221 380 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 HFEQ30201 348 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 SLC23A3Q6PIS1 610 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 ZNF818PQ6ZRF7 136 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 KDF1Q8NAX2 398 aaPredicted RBP11.25□□□□□ -0.61
PRDM16-208ENST00000514189 TIMP4Q99727 224 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 PCGF1Q9BSM1 259 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 HEXA-AS1Q9H8Q6 139 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 PRRC2CQ9Y520 2896 aaKnown RBP11.25□□□□□ -0.61
PRDM16-208ENST00000514189 LOC102724200A0A096LPH7 203 aaPredicted RBP11.25□□□□□ -0.61
PRDM16-208ENST00000514189 TRAV38-1A0A0B4J264 116 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 CRISP2P16562 243 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 LTBRP36941 435 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 RBPJQ06330 500 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 TMEM222Q9H0R3 208 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 ZNF552Q9H707 407 aaPredicted RBP11.25□□□□□ -0.61
PRDM16-208ENST00000514189 GTF3C1Q12789 2109 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 PATJQ8NI35 1801 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 IGKV1D-8A0A087WSZ0 117 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 A0A1W2PR77 199 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 TOX3O15405 576 aaPredicted RBP11.25□□□□□ -0.61
PRDM16-208ENST00000514189 CD74P04233 296 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 TNFAIP6P98066 277 aaPredicted RBP11.25□□□□□ -0.61
PRDM16-208ENST00000514189 C21orf62-AS1Q17RA5 79 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 LINC00114Q6XXX2 140 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 FLVCR1-AS1Q8TAF5 88 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 M1APQ8TC57 530 aa11.25□□□□□ -0.61
PRDM16-208ENST00000514189 NOTCH4Q99466 2003 aa11.24□□□□□ -0.61
PRDM16-208ENST00000514189 A0A1B0GTI1 187 aa11.24□□□□□ -0.61
PRDM16-208ENST00000514189 CRYM-AS1A6NIL9 109 aa11.24□□□□□ -0.61
PRDM16-208ENST00000514189 NCBP2LA6PVI3 153 aaKnown RBP11.24□□□□□ -0.61
PRDM16-208ENST00000514189 CNN1P51911 297 aaKnown RBP11.24□□□□□ -0.61
PRDM16-208ENST00000514189 CARFQ8N187 725 aa11.24□□□□□ -0.61
PRDM16-208ENST00000514189 FGFRL1Q8N441 504 aa11.24□□□□□ -0.61
PRDM16-208ENST00000514189 TTTY12Q9BZ98 90 aa11.24□□□□□ -0.61
PRDM16-208ENST00000514189 RFNGQ9Y644 331 aa11.24□□□□□ -0.61
PRDM16-208ENST00000514189 LRRC37A2A6NM11 1700 aa11.24□□□□□ -0.61
PRDM16-208ENST00000514189 C5orf63A6NC05 138 aa11.24□□□□□ -0.61
PRDM16-208ENST00000514189 J3QRE1 110 aa11.24□□□□□ -0.61
PRDM16-208ENST00000514189 SLC25A5P05141 298 aaKnown RBP11.24□□□□□ -0.61
PRDM16-208ENST00000514189 IGLV3-21P80748 117 aaPredicted RBP11.24□□□□□ -0.61
PRDM16-208ENST00000514189 TRA2AQ13595 282 aaKnown RBP eCLIP11.24□□□□□ -0.61
PRDM16-208ENST00000514189 KIAA1644Q3SXP7 199 aa11.24□□□□□ -0.61
PRDM16-208ENST00000514189 OR10G8Q8NGN5 311 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms