RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 PELI1Q96FA3 418 aa8.27□□□□□ -1.09
DDX41-216ENST00000513562 RDH12Q96NR8 316 aa8.27□□□□□ -1.09
DDX41-216ENST00000513562 OR2S2Q9NQN1 319 aa8.27□□□□□ -1.09
DDX41-216ENST00000513562 RCC2Q9P258 522 aaKnown RBP8.27□□□□□ -1.09
DDX41-216ENST00000513562 TRAPPC2LQ9UL33 140 aa8.27□□□□□ -1.09
DDX41-216ENST00000513562 SAA2-SAA4A0A096LPE2 208 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 C13orf42A0A1B0GVH6 325 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 ANKRD34BA5PLL1 514 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 MAGEB3O15480 346 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 DCTN3O75935 186 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 RPSAP08865 295 aaKnown RBP8.26□□□□□ -1.09
DDX41-216ENST00000513562 CD7P09564 240 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 SAA2P0DJI9 122 aaPredicted RBP8.26□□□□□ -1.09
DDX41-216ENST00000513562 OR3A3P47888 321 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 ALDH3A2P51648 485 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 PLGLAQ15195 96 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 TRAT1Q6PIZ9 186 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 CEMP1Q6PRD7 247 aaPredicted RBP8.26□□□□□ -1.09
DDX41-216ENST00000513562 FAM131AQ6UXB0 335 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 ZNF562Q6V9R5 426 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 POC5Q8NA72 575 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 METTL9Q9H1A3 318 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 WFDC10AQ9H1F0 79 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 SRD5A3Q9H8P0 318 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 SLC2A8Q9NY64 477 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 JPT1Q9UK76 154 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 ADAM30Q9UKF2 790 aa8.26□□□□□ -1.09
DDX41-216ENST00000513562 A0A0G2JLM5 398 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 DAPL1A0PJW8 107 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 H3BUA1 57 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 J3QLW9 94 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 OR2A4O95047 310 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 ZNF19P17023 458 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 RCC1P18754 421 aaPredicted RBP8.25□□□□□ -1.09
DDX41-216ENST00000513562 PPP1CCP36873 323 aaKnown RBP8.25□□□□□ -1.09
DDX41-216ENST00000513562 HSP90B2PQ58FF3 399 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 KDM4DQ6B0I6 523 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 FAM71F2Q6NXP2 309 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 OR8J1Q8NGP2 316 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 OR4K15Q8NH41 348 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 C4orf36Q96KX1 117 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 OVOL2Q9BRP0 275 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 RIBC2Q9H4K1 309 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 TAF9BQ9HBM6 251 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 SPACA1Q9HBV2 294 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 SLC23A1Q9UHI7 598 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 ARL2BPQ9Y2Y0 163 aa8.25□□□□□ -1.09
DDX41-216ENST00000513562 A0A1W2PP11 408 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 TCRBV3S1A0A5B6 114 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 TMEM212A6NML5 194 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 ZNF785A8K8V0 405 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 OR11H12B2RN74 326 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 ATP8B1O43520 1251 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 FADS2O95864 444 aaKnown RBP8.24□□□□□ -1.09
DDX41-216ENST00000513562 CA2P00918 260 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 SERPINA2P20848 420 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 EWSR1Q01844 656 aaKnown RBP eCLIP8.24□□□□□ -1.09
DDX41-216ENST00000513562 DYRK1AQ13627 763 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 TATDN3Q17R31 274 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 CD300EQ496F6 205 aaPredicted RBP8.24□□□□□ -1.09
DDX41-216ENST00000513562 LY6G6FQ5SQ64 297 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 LGALS9CQ6DKI2 356 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 ZNF554Q86TJ5 538 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 OR52L2PQ8NGH6 319 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 TSEN15Q8WW01 171 aaKnown RBP8.24□□□□□ -1.09
DDX41-216ENST00000513562 MRPS24Q96EL2 167 aaKnown RBP8.24□□□□□ -1.09
DDX41-216ENST00000513562 CLCC1Q96S66 551 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 JAM3Q9BX67 310 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 IFI27L2Q9H2X8 130 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 ZNF355PQ9NSJ1 428 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 MBNL3Q9NUK0 354 aaKnown RBP8.24□□□□□ -1.09
DDX41-216ENST00000513562 ZNF446Q9NWS9 450 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 PAK1IP1Q9NWT1 392 aaPredicted RBP8.24□□□□□ -1.09
DDX41-216ENST00000513562 TAS2R4Q9NYW5 299 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 PEF1Q9UBV8 284 aaKnown RBP8.24□□□□□ -1.09
DDX41-216ENST00000513562 ENOPH1Q9UHY7 261 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 ING4Q9UNL4 249 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 KLK5Q9Y337 293 aaPredicted RBP8.24□□□□□ -1.09
DDX41-216ENST00000513562 GMPPBQ9Y5P6 360 aa8.24□□□□□ -1.09
DDX41-216ENST00000513562 FAT2Q9NYQ8 4349 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 OR5H14A6NHG9 310 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 MCRIP1C9JLW8 97 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 H0YJW9 148 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 AIREO43918 545 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 YPEL1O60688 119 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 ZNF780AO75290 641 aaPredicted RBP8.23□□□□□ -1.09
DDX41-216ENST00000513562 SC5DO75845 299 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 RBBP9O75884 186 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 TRBV12-3P01733 135 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 CT45A6P0DMU7 189 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 CT45A5P0DMU8 189 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 CT45A7P0DMV0 189 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 GTF2F2P13984 249 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 SNRPBP14678 240 aaKnown RBP8.23□□□□□ -1.09
DDX41-216ENST00000513562 AADACP22760 399 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 POLR2IP36954 125 aaKnown RBP8.23□□□□□ -1.09
DDX41-216ENST00000513562 HTD2P86397 168 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 ZNF343Q6P1L6 599 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 SPATA24Q86W54 205 aa8.23□□□□□ -1.09
DDX41-216ENST00000513562 ACBD7Q8N6N7 88 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms