RNA–Protein interactions for RNA: ENST00000512853.5

SNX25-205, Transcript of sorting nexin 25, humanhuman

TSL 1 (best)

Gene SNX25, Length 1,937 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-205ENST00000512853 HS3ST1O14792 307 aa9.8□□□□□ -0.84
SNX25-205ENST00000512853 ZNF737O75373 536 aa9.8□□□□□ -0.84
SNX25-205ENST00000512853 NGFP01138 241 aa9.8□□□□□ -0.84
SNX25-205ENST00000512853 ARR3P36575 388 aa9.8□□□□□ -0.84
SNX25-205ENST00000512853 JOSD1Q15040 202 aaPredicted RBP9.8□□□□□ -0.84
SNX25-205ENST00000512853 C4orf17Q53FE4 359 aa9.8□□□□□ -0.84
SNX25-205ENST00000512853 OR1P1Q8NH06 330 aa9.8□□□□□ -0.84
SNX25-205ENST00000512853 PCSK5Q92824 1860 aa9.8□□□□□ -0.84
SNX25-205ENST00000512853 SMIM7Q9BQ49 75 aa9.8□□□□□ -0.84
SNX25-205ENST00000512853 GPR87Q9BY21 358 aa9.8□□□□□ -0.84
SNX25-205ENST00000512853 PILRBQ9UKJ0 227 aa9.8□□□□□ -0.84
SNX25-205ENST00000512853 UBE2L5PA0A1B0GUS4 154 aa9.79□□□□□ -0.84
SNX25-205ENST00000512853 ANKRD30BLA7E2S9 258 aa9.79□□□□□ -0.84
SNX25-205ENST00000512853 ZNHIT1O43257 154 aa9.79□□□□□ -0.84
SNX25-205ENST00000512853 IGKV1D-33P01593 117 aa9.79□□□□□ -0.84
SNX25-205ENST00000512853 IGKV1-33P01594 117 aa9.79□□□□□ -0.84
SNX25-205ENST00000512853 LHX2P50458 406 aa9.79□□□□□ -0.84
SNX25-205ENST00000512853 ELLP55199 621 aaPredicted RBP9.79□□□□□ -0.84
SNX25-205ENST00000512853 FOXG1P55316 489 aaPredicted RBP9.79□□□□□ -0.84
SNX25-205ENST00000512853 MEF2BQ02080 365 aaPredicted RBP9.79□□□□□ -0.84
SNX25-205ENST00000512853 CLN3Q13286 438 aa9.79□□□□□ -0.84
SNX25-205ENST00000512853 ADIRFQ15847 76 aa9.79□□□□□ -0.84
SNX25-205ENST00000512853 TMEM241Q24JQ0 296 aa9.79□□□□□ -0.84
SNX25-205ENST00000512853 C9orf135Q5VTT2 229 aa9.79□□□□□ -0.84
SNX25-205ENST00000512853 PMS2CLQ68D20 193 aa9.79□□□□□ -0.84
SNX25-205ENST00000512853 C17orf78Q8N4C9 275 aa9.79□□□□□ -0.84
SNX25-205ENST00000512853 LHX4Q969G2 390 aa9.79□□□□□ -0.84
SNX25-205ENST00000512853 OR51I2Q9H344 312 aa9.79□□□□□ -0.84
SNX25-205ENST00000512853 PRSS50Q9UI38 385 aa9.79□□□□□ -0.84
SNX25-205ENST00000512853 BOKQ9UMX3 212 aaPredicted RBP9.79□□□□□ -0.84
SNX25-205ENST00000512853 AMBPP02760 352 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 SERPINA7P05543 415 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 JMJD7P0C870 316 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 OTX2P32243 289 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 RPL23P62829 140 aaKnown RBP9.78□□□□□ -0.84
SNX25-205ENST00000512853 COL10A1Q03692 680 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 BSXQ3C1V8 233 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 ZNF497Q6ZNH5 498 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 RAB24Q969Q5 203 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 SLC39A9Q9NUM3 307 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 PPP1R3CQ9UQK1 317 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 CNTRLQ7Z7A1 2325 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 A0A087X0M5 115 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 CTXND1A0A1B0GTU2 59 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 A0A1B0GX30 115 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 ARGFXA6NJG6 315 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 RNF212BA8MTL3 300 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 H7BYZ3 331 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 LILRA1O75019 489 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 P0C879 139 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 MDKP21741 143 aaPredicted RBP9.78□□□□□ -0.84
SNX25-205ENST00000512853 FGF7P21781 194 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 CYB561P49447 251 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 PDLIM4P50479 330 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 CLDN18P56856 261 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 ATP6V1FQ16864 119 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 SPANXN5Q5MJ07 72 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 ACSM6Q6P461 480 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 BEND4Q6ZU67 534 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 RPP25LQ8N5L8 163 aaKnown RBP9.78□□□□□ -0.84
SNX25-205ENST00000512853 OR51G1Q8NGK1 321 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 IL1F10Q8WWZ1 152 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 TMEM147Q9BVK8 224 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 ACTR3CQ9C0K3 210 aaPredicted RBP9.78□□□□□ -0.84
SNX25-205ENST00000512853 SMOC1Q9H4F8 434 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 ZNF703Q9H7S9 590 aaPredicted RBP9.78□□□□□ -0.84
SNX25-205ENST00000512853 MANBALQ9NQG1 85 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 HSPB7Q9UBY9 170 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 KCNS2Q9ULS6 477 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 GAB2Q9UQC2 676 aa9.78□□□□□ -0.84
SNX25-205ENST00000512853 LAMA1P25391 3075 aa9.77□□□□□ -0.84
SNX25-205ENST00000512853 COL27A1Q8IZC6 1860 aaPredicted RBP9.77□□□□□ -0.84
SNX25-205ENST00000512853 ZNF407Q9C0G0 2248 aa9.77□□□□□ -0.84
SNX25-205ENST00000512853 KIAA2026Q5HYC2 2103 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 SYNGR4O95473 234 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 HRASP01112 189 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 CD55P08174 381 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 WNT5AP41221 380 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 DUSP3P51452 185 aaPredicted RBP9.77□□□□□ -0.85
SNX25-205ENST00000512853 PLP2Q04941 152 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 TNFRSF9Q07011 255 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 UNQ6494/PRO21346Q6UXR6 183 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 SSX9Q7RTT3 188 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.77□□□□□ -0.85
SNX25-205ENST00000512853 TUSC5Q8IXB3 177 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 DRAM1Q8N682 238 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 OR1K1Q8NGR3 316 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 TMEM170AQ8WVE7 144 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 ACY3Q96HD9 319 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 PRO1933Q9H354 126 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 MBNL3Q9NUK0 354 aaKnown RBP9.77□□□□□ -0.85
SNX25-205ENST00000512853 LAMP3Q9UQV4 416 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 WIPI2Q9Y4P8 454 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 FREM1Q5H8C1 2179 aa9.77□□□□□ -0.85
SNX25-205ENST00000512853 A0A1W2PR80 420 aa9.76□□□□□ -0.85
SNX25-205ENST00000512853 B4E171 279 aa9.76□□□□□ -0.85
SNX25-205ENST00000512853 SLC31A2O15432 143 aa9.76□□□□□ -0.85
SNX25-205ENST00000512853 GGCTO75223 188 aaKnown RBP9.76□□□□□ -0.85
SNX25-205ENST00000512853 RHBDL1O75783 438 aa9.76□□□□□ -0.85
SNX25-205ENST00000512853 MBP02144 154 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms