RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.14■□□□□ 0.01
CCHCR1-228ENST00000509552 TMEM30CPA0ZSE6 113 aa15.14■□□□□ 0.01
CCHCR1-228ENST00000509552 UBE2KP61086 200 aa15.14■□□□□ 0.01
CCHCR1-228ENST00000509552 FAM214BQ7L5A3 538 aa15.14■□□□□ 0.01
CCHCR1-228ENST00000509552 ZNF429Q86V71 674 aa15.14■□□□□ 0.01
CCHCR1-228ENST00000509552 LILRB2Q8N423 598 aa15.14■□□□□ 0.01
CCHCR1-228ENST00000509552 UBE2CO00762 179 aa15.13■□□□□ 0.01
CCHCR1-228ENST00000509552 EIF3GO75821 320 aaKnown RBP eCLIP15.13■□□□□ 0.01
CCHCR1-228ENST00000509552 ACAA1P09110 424 aaPredicted RBP15.13■□□□□ 0.01
CCHCR1-228ENST00000509552 HOXC12P31275 282 aa15.13■□□□□ 0.01
CCHCR1-228ENST00000509552 SOX8P57073 446 aa15.13■□□□□ 0.01
CCHCR1-228ENST00000509552 CYB561D1Q8N8Q1 229 aa15.13■□□□□ 0.01
CCHCR1-228ENST00000509552 RAB39BQ96DA2 213 aa15.13■□□□□ 0.01
CCHCR1-228ENST00000509552 TRIB1Q96RU8 372 aa15.13■□□□□ 0.01
CCHCR1-228ENST00000509552 NIPSNAP3BQ9BS92 247 aa15.13■□□□□ 0.01
CCHCR1-228ENST00000509552 H0YL77 283 aa15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 MAS1LP35410 378 aa15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 TAGLN2P37802 199 aaKnown RBP15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 Q6ZT83 130 aa15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 ZNF525Q8N782 197 aa15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 KLF14Q8TD94 323 aaPredicted RBP15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 GALMQ96C23 342 aa15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 PSMG3Q9BT73 122 aaPredicted RBP15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 RSG1Q9BU20 258 aa15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 CLCF1Q9UBD9 225 aa15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 FAM90A26D6RGX4 464 aa15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 S100A8P05109 93 aa15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 FGFRL1Q8N441 504 aa15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 ZNF645Q8N7E2 425 aa15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 ZBTB34Q8NCN2 500 aa15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 TVP23CQ96ET8 276 aa15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 TINAGQ9UJW2 476 aa15.12■□□□□ 0.01
CCHCR1-228ENST00000509552 IFNA17P01571 189 aa15.11■□□□□ 0.01
CCHCR1-228ENST00000509552 FBP1P09467 338 aa15.11■□□□□ 0.01
CCHCR1-228ENST00000509552 OR8U8P0C7N1 319 aa15.11■□□□□ 0.01
CCHCR1-228ENST00000509552 HOXB1P14653 301 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-228ENST00000509552 IL2RGP31785 369 aa15.11■□□□□ 0.01
CCHCR1-228ENST00000509552 HES4Q9HCC6 221 aa15.11■□□□□ 0.01
CCHCR1-228ENST00000509552 MMP24Q9Y5R2 645 aa15.11■□□□□ 0.01
CCHCR1-228ENST00000509552 A0A087WWC5 75 aa15.11■□□□□ 0.01
CCHCR1-228ENST00000509552 MPV17P39210 176 aa15.11■□□□□ 0.01
CCHCR1-228ENST00000509552 CEBPDP49716 269 aaPredicted RBP15.11■□□□□ 0.01
CCHCR1-228ENST00000509552 OR2B8PP59922 312 aa15.11■□□□□ 0.01
CCHCR1-228ENST00000509552 SERF2P84101 59 aa15.11■□□□□ 0.01
CCHCR1-228ENST00000509552 SPANXN5Q5MJ07 72 aa15.11■□□□□ 0.01
CCHCR1-228ENST00000509552 CNEP1R1Q8N9A8 125 aa15.11■□□□□ 0.01
CCHCR1-228ENST00000509552 RPRMQ9NS64 109 aa15.11■□□□□ 0.01
CCHCR1-228ENST00000509552 GNG13Q9P2W3 67 aa15.11■□□□□ 0.01
CCHCR1-228ENST00000509552 LOC102723971A0A1B0GUV8 181 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 PSPNO60542 156 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 IGHG3P01860 377 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 S100A9P06702 114 aaKnown RBP15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 ZNF806P0C7X5 589 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 CBR1P16152 277 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 OR3A1P47881 315 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 DLK1P80370 383 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 ARL16Q0P5N6 197 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 LRRC75BQ2VPJ9 315 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 OR10G4Q8NGN3 311 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 CELSR3Q9NYQ7 3312 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 METTL1Q9UBP6 276 aaKnown RBP15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 OOEPA6NGQ2 149 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 ZNF787Q6DD87 383 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 SLC35E4Q6ICL7 350 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 SLC35E3Q7Z769 313 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 OR1L1Q8NH94 360 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 NINJ1Q92982 152 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 MUCL1Q96DR8 90 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 OR2D2Q9H210 308 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 CXXC4Q9H2H0 198 aa15.1■□□□□ 0.01
CCHCR1-228ENST00000509552 A0A1W2PPE3 182 aa15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 FABP9Q0Z7S8 132 aa15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 TRIP6Q15654 476 aaKnown RBP15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 MSMO1Q15800 293 aa15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 HEPN1Q6WQI6 88 aa15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 CXorf67Q86X51 503 aaPredicted RBP15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 C1QL4Q86Z23 238 aa15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 YPEL4Q96NS1 127 aa15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 PARD6GQ9BYG4 376 aaPredicted RBP15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 C12orf77C9JDV5 145 aa15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 CD82P27701 267 aa15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 CCL11P51671 97 aa15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 CATR1Q13166 79 aa15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 HAPLN4Q86UW8 402 aa15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 MBD3L1Q8WWY6 194 aa15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 PINX1Q96BK5 328 aaKnown RBP15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 WDR61Q9GZS3 305 aaKnown RBP15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 CISD1Q9NZ45 108 aaKnown RBP15.09■□□□□ 0.01
CCHCR1-228ENST00000509552 ZFP92A6NM28 416 aa15.08■□□□□ 0
CCHCR1-228ENST00000509552 WNT9BO14905 357 aa15.08■□□□□ 0
CCHCR1-228ENST00000509552 MLNRO43193 412 aa15.08■□□□□ 0
CCHCR1-228ENST00000509552 CLDN1O95832 211 aa15.08■□□□□ 0
CCHCR1-228ENST00000509552 S100A12P80511 92 aa15.08■□□□□ 0
CCHCR1-228ENST00000509552 AESQ08117 197 aa15.08■□□□□ 0
CCHCR1-228ENST00000509552 ACSF3Q4G176 576 aaPredicted RBP15.08■□□□□ 0
CCHCR1-228ENST00000509552 LCN15Q6UWW0 184 aa15.08■□□□□ 0
CCHCR1-228ENST00000509552 ZNF826PQ6ZT77 177 aa15.08■□□□□ 0
CCHCR1-228ENST00000509552 TCEAL7Q9BRU2 100 aa15.08■□□□□ 0
CCHCR1-228ENST00000509552 SIRT7Q9NRC8 400 aa15.08■□□□□ 0
CCHCR1-228ENST00000509552 ZNF727A8MUV8 499 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms