RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 PRSS44E7EML9 344 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 UBE2CO00762 179 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 CTXN2P0C2S0 81 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 SULT1A1P50225 295 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 LINC00205P59089 165 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 RND3P61587 244 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 TCF15Q12870 199 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 OR2B11Q5JQS5 317 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 LINC00596Q86U02 117 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 OR10V1Q8NGI7 309 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 CD300LFQ8TDQ1 290 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 GPR146Q96CH1 333 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 STARD4Q96DR4 205 aa12.22□□□□□ -0.45
DDX41-208ENST00000507955 RIMS4Q9H426 269 aaPredicted RBP12.22□□□□□ -0.45
DDX41-208ENST00000507955 HAND1O96004 215 aa12.21□□□□□ -0.45
DDX41-208ENST00000507955 VDAC1P21796 283 aa12.21□□□□□ -0.45
DDX41-208ENST00000507955 ATP6V0CP27449 155 aa12.21□□□□□ -0.45
DDX41-208ENST00000507955 RUNX1Q01196 453 aa12.21□□□□□ -0.45
DDX41-208ENST00000507955 MSMPQ1L6U9 139 aa12.21□□□□□ -0.45
DDX41-208ENST00000507955 RNF212Q495C1 297 aa12.21□□□□□ -0.45
DDX41-208ENST00000507955 LRP11Q86VZ4 500 aa12.21□□□□□ -0.45
DDX41-208ENST00000507955 TMEM252Q8N6L7 170 aa12.21□□□□□ -0.45
DDX41-208ENST00000507955 OR5C1Q8NGR4 320 aa12.21□□□□□ -0.45
DDX41-208ENST00000507955 OR1L1Q8NH94 360 aa12.21□□□□□ -0.45
DDX41-208ENST00000507955 SARAFQ96BY9 339 aa12.21□□□□□ -0.45
DDX41-208ENST00000507955 PLPPR2Q96GM1 343 aa12.21□□□□□ -0.45
DDX41-208ENST00000507955 SLC35B3Q9H1N7 401 aa12.21□□□□□ -0.45
DDX41-208ENST00000507955 TIMM8AO60220 97 aaPredicted RBP12.21□□□□□ -0.46
DDX41-208ENST00000507955 RAB5AP20339 215 aa12.21□□□□□ -0.46
DDX41-208ENST00000507955 SPRNQ5BIV9 151 aa12.21□□□□□ -0.46
DDX41-208ENST00000507955 SPSB3Q6PJ21 355 aa12.21□□□□□ -0.46
DDX41-208ENST00000507955 TUBA4BQ9H853 241 aa12.21□□□□□ -0.46
DDX41-208ENST00000507955 POLDIP2Q9Y2S7 368 aa12.21□□□□□ -0.46
DDX41-208ENST00000507955 STRAPQ9Y3F4 350 aaKnown RBP12.21□□□□□ -0.46
DDX41-208ENST00000507955 PLCE1Q9P212 2302 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 PRR33A8MZF0 331 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 WRBO00258 174 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 SH2D1BO14796 132 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 PTBP3O95758 552 aaKnown RBP12.2□□□□□ -0.46
DDX41-208ENST00000507955 SERPINE2P07093 398 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 COX5AP20674 150 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 OR3A1P47881 315 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 DYNLT3P51808 116 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 OR8G5Q8NG78 346 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 DCTN5Q9BTE1 182 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 TRBV6-6A0A0A6YYG2 114 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 IGHV1-18A0A0C4DH31 117 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 H0Y980 276 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 PLA2G5P39877 138 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 RAB5CP51148 216 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 PAX9P55771 341 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 OR2B8PP59922 312 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 SRPXP78539 464 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 FABP9Q0Z7S8 132 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 ZNF146Q15072 292 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 ZNF561Q8N587 486 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 OR52L2PQ8NGH6 319 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 OR5D13Q8NGL4 314 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 RNASE11Q8TAA1 199 aaKnown RBP12.2□□□□□ -0.46
DDX41-208ENST00000507955 RFESDQ8TAC1 157 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 CABLES2Q9BTV7 478 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 BCL2L14Q9BZR8 327 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 KCNJ16Q9NPI9 418 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 DUSP13Q9UII6 198 aa12.2□□□□□ -0.46
DDX41-208ENST00000507955 DOCK11Q5JSL3 2073 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 IGHV3-43A0A0B4J1X8 118 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 IGHV3-43DP0DP04 118 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 VAMP2P63027 116 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 ID3Q02535 119 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 HAGHQ16775 308 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 ADAM5Q6NVV9 412 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 ZNF295-AS1Q8N0V1 137 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 KDF1Q8NAX2 398 aaPredicted RBP12.19□□□□□ -0.46
DDX41-208ENST00000507955 OR2G3Q8NGZ4 309 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 ZNF71Q9NQZ8 489 aaPredicted RBP12.19□□□□□ -0.46
DDX41-208ENST00000507955 PUS1Q9Y606 427 aaKnown RBP eCLIP12.19□□□□□ -0.46
DDX41-208ENST00000507955 DEFB108AA8MXU0 73 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 IGHV2-5P01817 119 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 OR8U8P0C7N1 319 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 ZNF83P51522 516 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 RPS23P62266 143 aaKnown RBP12.19□□□□□ -0.46
DDX41-208ENST00000507955 TMEM267Q0VDI3 215 aaPredicted RBP12.19□□□□□ -0.46
DDX41-208ENST00000507955 VHLLQ6RSH7 139 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 WDR82Q6UXN9 313 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 ZNF808Q8N4W9 903 aaPredicted RBP12.19□□□□□ -0.46
DDX41-208ENST00000507955 MRGPRDQ8TDS7 321 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 YPEL4Q96NS1 127 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 PLSCR4Q9NRQ2 329 aa12.19□□□□□ -0.46
DDX41-208ENST00000507955 LYRM2Q9NU23 88 aaPredicted RBP12.19□□□□□ -0.46
DDX41-208ENST00000507955 IGHV2OR16-5A0A0B4J2B6 119 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 S100A6P06703 90 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 IAPPP10997 89 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 LTC4SQ16873 150 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 ZNF585BQ52M93 769 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 RBMXL1Q96E39 390 aaKnown RBP12.18□□□□□ -0.46
DDX41-208ENST00000507955 CACNG5Q9UF02 275 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 RNF115Q9Y4L5 304 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 LINC00587B1AMM8 73 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 C12orf77C9JDV5 145 aa12.18□□□□□ -0.46
DDX41-208ENST00000507955 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms