RNA–Protein interactions for RNA: ENST00000507116.5

PDE4D-216, Transcript of phosphodiesterase 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE4D, Length 3,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-216ENST00000507116 COL18A1P39060 1754 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 DUXBA0A1W2PPF3 345 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 DAPL1A0PJW8 107 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 TMEM250H0YL14 139 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 PLPP3O14495 311 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 MT-ATP8P03928 68 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 HPNP05981 417 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 CELA3BP08861 270 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 IGLL1P15814 213 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 RPL7P18124 248 aaKnown RBP5.3□□□□□ -1.56
PDE4D-216ENST00000507116 SRIP30626 198 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 MTCP1P56278 107 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 LINC00310P59036 64 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 TAS2R46P59540 309 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 IGFBP7Q16270 282 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 RPEL1Q2QD12 228 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 ACSM2BQ68CK6 577 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 DMKNQ6E0U4 476 aaPredicted RBP5.3□□□□□ -1.56
PDE4D-216ENST00000507116 FAM19A5Q7Z5A7 132 aaPredicted RBP5.3□□□□□ -1.56
PDE4D-216ENST00000507116 BORCS7Q96B45 105 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 SGK494Q96LW2 274 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 DUX3Q96PT4 197 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 CDX2Q99626 313 aaPredicted RBP5.3□□□□□ -1.56
PDE4D-216ENST00000507116 SIRPDQ9H106 197 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 MAP1LC3AQ9H492 121 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 GP6Q9HCN6 339 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 LHX3Q9UBR4 397 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 SLC2A6Q9UGQ3 507 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 TP53TG3Q9ULZ0 132 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 POLDIP2Q9Y2S7 368 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 V9GYY9 64 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 NUP205Q92621 2012 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 A0A1W2PRX2 142 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 MANSC4A6NHS7 340 aaPredicted RBP5.3□□□□□ -1.56
PDE4D-216ENST00000507116 SHISA7A6NL88 538 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 FNDC10F2Z333 226 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 H0YJW9 148 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 MT-CO3P00414 261 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 CXCL10P02778 98 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 C3orf79P0CE67 100 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 PVRP15151 417 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 AADACP22760 399 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 EDNRAP25101 427 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 PSG4Q00888 419 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 SRSF2Q01130 221 aaKnown RBP5.3□□□□□ -1.56
PDE4D-216ENST00000507116 MZT1Q08AG7 82 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 B3GALNT2Q8NCR0 500 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 SCAMP5Q8TAC9 235 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 DDB2Q92466 427 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 COMMD5Q9GZQ3 224 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 CHST8Q9H2A9 424 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 NUDT4Q9NZJ9 180 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 ZNF257Q9Y2Q1 563 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 CEP290O15078 2479 aa5.3□□□□□ -1.56
PDE4D-216ENST00000507116 GRIFINA4D1Z8 144 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 K7EN84 100 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 C8orf88P0DMB2 117 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 HIST1H1DP16402 221 aaKnown RBP5.29□□□□□ -1.56
PDE4D-216ENST00000507116 ADMP35318 185 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 DRD3P35462 400 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 LHX2P50458 406 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 EMP1P54849 157 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 RELBQ01201 579 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 POM121L1PQ3SYA9 428 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 Q6AWC8 147 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 CHRDL2Q6WN34 429 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 CYP2G1PQ6ZSU1 146 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 LRRC25Q8N386 305 aaPredicted RBP5.29□□□□□ -1.56
PDE4D-216ENST00000507116 TMEM54Q969K7 222 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 ST6GALNAC6Q969X2 333 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 SMIM19Q96E16 107 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 AGMATQ9BSE5 352 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 CISD1Q9NZ45 108 aaKnown RBP5.29□□□□□ -1.56
PDE4D-216ENST00000507116 HS3ST4Q9Y661 456 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 TDRD15B5MCY1 1934 aaKnown RBP5.29□□□□□ -1.56
PDE4D-216ENST00000507116 SAA2-SAA4A0A096LPE2 208 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 FAM90A27PA6NNH2 459 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 GCM2O75603 506 aaPredicted RBP5.29□□□□□ -1.56
PDE4D-216ENST00000507116 CYBAP13498 195 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 VDAC1P21796 283 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 IL3RAP26951 378 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 HTR1DP28221 377 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 PPIFP30405 207 aaKnown RBP5.29□□□□□ -1.56
PDE4D-216ENST00000507116 MEIG1Q5JSS6 88 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 DHRS13Q6UX07 377 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 ZNF433Q8N7K0 673 aaPredicted RBP5.29□□□□□ -1.56
PDE4D-216ENST00000507116 CT55Q8WUE5 264 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 NEUROG1Q92886 237 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 DUSP13Q9UII6 198 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 RNF114Q9Y508 228 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 A0A1W2PPK0 400 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 C3orf80F5H4A9 247 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 J3QRE1 110 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 M0QYG6 137 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 VDAC2P45880 294 aaPredicted RBP5.29□□□□□ -1.56
PDE4D-216ENST00000507116 NDUFV3P56181 108 aaKnown RBP5.29□□□□□ -1.56
PDE4D-216ENST00000507116 LTBQ06643 244 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 CD226Q15762 336 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 CLDN19Q8N6F1 224 aa5.29□□□□□ -1.56
PDE4D-216ENST00000507116 TMEM178AQ8NBL3 297 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms