RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 TRGV10A0A0A0MS01 117 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 TRBV23-1A0A0A0MS06 115 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 hADV38S2A0JD32 116 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 CRYM-AS1A6NIL9 109 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 C17orf98A8MV24 154 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 A8MXK9 166 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 G3V3Q6 166 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 PROP1O75360 226 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 SFT2D2O95562 160 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 CXCL3P19876 107 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 GZMHP20718 246 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 ZNF134P52741 427 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 ANKRD55Q3KP44 614 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 LY6G6FQ5SQ64 297 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 METTL11BQ5VVY1 283 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 LYG2Q86SG7 212 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 ODF3L1Q8IXM7 274 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 SLC38A6Q8IZM9 456 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 SPICQ8N5J4 248 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 OR8B3Q8NGG8 313 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 OR10V1Q8NGI7 309 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 OR10J5Q8NHC4 309 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 CLDND2Q8NHS1 167 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 ZNF431Q8TF32 576 aaPredicted RBP8.53□□□□□ -1.04
TPM3-217ENST00000504663 TOMM40LQ969M1 308 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 GALMQ96C23 342 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 WDR89Q96FK6 387 aaPredicted RBP8.53□□□□□ -1.04
TPM3-217ENST00000504663 TIMD4Q96H15 378 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 OR8B2Q96RD0 313 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 GPHA2Q96T91 129 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 SLC2A9Q9NRM0 540 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 IDI2-AS1Q9NZ38 188 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 KCNIP1Q9NZI2 227 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 RPUSD1Q9UJJ7 312 aaKnown RBP8.53□□□□□ -1.04
TPM3-217ENST00000504663 UNC79Q9P2D8 2635 aa8.53□□□□□ -1.04
TPM3-217ENST00000504663 IGHV4-30-2A0A087WSY4 118 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 A0A087X0M5 115 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 A0A1B0GX30 115 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 FAM172BPA6NC97 362 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 DBX1A6NMT0 343 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 ITGB1BP1O14713 200 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 PHF1O43189 567 aaPredicted RBP8.52□□□□□ -1.05
TPM3-217ENST00000504663 SPINT2O43291 252 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 YPEL1O60688 119 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 PGAM2P15259 253 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 ZFP36P26651 326 aaKnown RBP8.52□□□□□ -1.05
TPM3-217ENST00000504663 SSTR2P30874 369 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 IL2RGP31785 369 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 CEACAM6P40199 344 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 PDLIM4P50479 330 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 TAS2R31P59538 309 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 HERV-K104P61576 105 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 MORN2Q502X0 79 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 TMEM128Q5BJH2 165 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 CD276Q5ZPR3 534 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 HEPN1Q6WQI6 88 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 BVESQ8NE79 360 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 OR52M1Q8NGK5 317 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 LHFPL5Q8TAF8 219 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 ZNF596Q8TC21 504 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 MITD1Q8WV92 249 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 SECTM1Q8WVN6 248 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 GALNT14Q96FL9 552 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 ZNF486Q96H40 463 aaPredicted RBP8.52□□□□□ -1.05
TPM3-217ENST00000504663 ZNF714Q96N38 554 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 YPEL2Q96QA6 119 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 ARPC5LQ9BPX5 153 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 ZNF251Q9BRH9 671 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 SLC5A7Q9GZV3 580 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 NARFLQ9H6Q4 476 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 NAA60Q9H7X0 242 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 ASH1LQ9NR48 2969 aaKnown RBP8.52□□□□□ -1.05
TPM3-217ENST00000504663 PRR13Q9NZ81 148 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 PIPOXQ9P0Z9 390 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 LPAR3Q9UBY5 353 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 ARID1AO14497 2285 aa8.52□□□□□ -1.05
TPM3-217ENST00000504663 YLPM1P49750 1951 aaKnown RBP8.52□□□□□ -1.05
TPM3-217ENST00000504663 IGHV4-61A0A0C4DH41 118 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 A8MV72 311 aaPredicted RBP8.51□□□□□ -1.05
TPM3-217ENST00000504663 GPR31O00270 319 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 ST8SIA5O15466 376 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 DUS4LO95620 317 aaKnown RBP8.51□□□□□ -1.05
TPM3-217ENST00000504663 HLA-AP01891 365 aaKnown RBP8.51□□□□□ -1.05
TPM3-217ENST00000504663 AKR1C4P17516 323 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 LUMP51884 338 aaPredicted RBP8.51□□□□□ -1.05
TPM3-217ENST00000504663 ATP5J2P56134 94 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 PIGPP57054 158 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 BRWD1-AS2P59051 145 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 CBX3Q13185 183 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 TMEM187Q14656 261 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 MSMO1Q15800 293 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 LTC4SQ16873 150 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 TMEM30BQ3MIR4 351 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 PHLDA2Q53GA4 152 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 CT45A1Q5HYN5 189 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 FAM185AQ8N0U4 392 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 DRAM1Q8N682 238 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 Q8N7P7 452 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 ZNF565Q8N9K5 539 aa8.51□□□□□ -1.05
TPM3-217ENST00000504663 OR10A7Q8NGE5 316 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms