RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 UFSP1Q6NVU6 142 aa8.24□□□□□ -1.09
PDLIM5-207ENST00000503974 DPPA3Q6W0C5 159 aa8.24□□□□□ -1.09
PDLIM5-207ENST00000503974 OLIG3Q7RTU3 272 aa8.24□□□□□ -1.09
PDLIM5-207ENST00000503974 C1orf174Q8IYL3 243 aa8.24□□□□□ -1.09
PDLIM5-207ENST00000503974 OR4C3Q8NH37 302 aa8.24□□□□□ -1.09
PDLIM5-207ENST00000503974 NFKBIDQ8NI38 313 aa8.24□□□□□ -1.09
PDLIM5-207ENST00000503974 TMEM37Q8WXS4 190 aa8.24□□□□□ -1.09
PDLIM5-207ENST00000503974 NIPSNAP3BQ9BS92 247 aa8.24□□□□□ -1.09
PDLIM5-207ENST00000503974 PSMG3Q9BT73 122 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-207ENST00000503974 LOC400499M0QZD8 3231 aa8.24□□□□□ -1.09
PDLIM5-207ENST00000503974 TRAV17A0A0B4J275 112 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 CENPVL1A0A0U1RR11 272 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 RAD51DO75771 328 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 IL2RAP01589 272 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 CSTBP04080 98 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 SP1P08047 785 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 SUMO1P63165 101 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 CYCSP99999 105 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 GAGE5Q13069 117 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 GAGE6Q13070 117 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 GABRA6Q16445 453 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 CD300EQ496F6 205 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 DOLPP1Q86YN1 238 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 MUC15Q8N387 334 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 GALMQ96C23 342 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 GPA33Q99795 319 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 LPAR5Q9H1C0 372 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 ZNF391Q9UJN7 358 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 MGAQ8IWI9 3026 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 ZZEF1O43149 2961 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 IGLV3-32A0A0A0MS00 114 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 A0A1W2PR80 420 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 RBFOX3A6NFN3 312 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 JTBO76095 146 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 S1PR2O95136 353 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 PFN1P07737 140 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 CD33P20138 364 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 CDK2P24941 298 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 CNN1P51911 297 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 FAM3BP58499 235 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 ZNF766Q5HY98 468 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 RAET1LQ5VY80 246 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 ZNF880Q6PDB4 577 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 ARL9Q6T311 187 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 KLHDC1Q8N7A1 406 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 TMEM217Q8N7C4 229 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 TMEM178AQ8NBL3 297 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 OR5A2Q8NGI9 324 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 OR13C9Q8NGT0 318 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 PPP1R35Q8TAP8 253 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 ZG16BQ96DA0 208 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 TSPAN32Q96QS1 320 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 DERL1Q9BUN8 251 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 HES7Q9BYE0 225 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 NMNAT2Q9BZQ4 307 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 RTN4RQ9BZR6 473 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 PARP12Q9H0J9 701 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 DEPPQ9NTK1 212 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 KLF13Q9Y2Y9 288 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 STRAPQ9Y3F4 350 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 EML6Q6ZMW3 1958 aa8.23□□□□□ -1.09
PDLIM5-207ENST00000503974 GAGE12HA6NDE8 117 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 TRAF3IP2O43734 574 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 NUPR1O60356 82 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 HLA-AP01891 365 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 P04436 131 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 CDKN1AP38936 164 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 CX3CR1P49238 355 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 TAS2R43P59537 309 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 ARF1P84077 181 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 ZNF92Q03936 586 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 ZNF266Q14584 549 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 SPATA31B1PQ5VZV4 182 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 TMEM256Q8N2U0 113 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 LINC00471Q8N535 108 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 OR6T1Q8NGN1 323 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 SYNPRQ8TBG9 265 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 UHRF2Q96PU4 802 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 TIMP4Q99727 224 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 RTBDNQ9BSG5 229 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 RSG1Q9BU20 258 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 SLC25A18Q9H1K4 315 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 MRPS28Q9Y2Q9 187 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 TSSC4Q9Y5U2 329 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 ITPR1Q14643 2758 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 A0A0G2JMM0 328 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 A0A1W2PPB8 328 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 MAP1LC3B2A6NCE7 125 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 KIR3DP1A8MWS1 328 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 J3QRE1 110 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 DBIP07108 87 aaKnown RBP8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 SEC11BP0C7V7 166 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 RUNX1Q01196 453 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 CD226Q15762 336 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 KIAA1644Q3SXP7 199 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 ZNF788Q6ZQV5 615 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 DEFB125Q8N687 156 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 TCTEX1D1Q8N7M0 179 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 Q8N976 141 aa8.22□□□□□ -1.09
PDLIM5-207ENST00000503974 ZFP62Q8NB50 900 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms