RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 MGAT4CQ9UBM8 478 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 CLN8Q9UBY8 286 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 C14orf166Q9Y224 244 aaKnown RBP5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 LINC00312Q9Y6C7 94 aa5.68□□□□□ -1.5
TOPBP1-203ENST00000503464 TRGV10A0A0A0MS01 117 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 hADV38S2A0JD32 116 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF729A6NN14 1252 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 MPTX1A8MV57 137 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 KIAA1324LA8MWY0 1029 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 C22orf46C9J442 243 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 GPR31O00270 319 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 CCSO14618 274 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 GOSR2O14653 212 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 SPINT2O43291 252 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 HSPA12AO43301 675 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 TNFSF12O43508 249 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 PROP1O75360 226 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 ADAP1O75689 374 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 IGHV3-7P01780 117 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 OR5AC1P0C628 307 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 OR8U9P0C7N5 309 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 HLA-GP17693 338 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 CD34P28906 385 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 LUMP51884 338 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 TMEM187Q14656 261 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 KCNJ8Q15842 424 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 SP6Q3SY56 376 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 MORN2Q502X0 79 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 LRRC10Q5BKY1 277 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 Q5BKY6 102 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 WDR25Q64LD2 544 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 HIST2H2BCQ6DN03 193 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 C1orf229Q6ZS94 237 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 NLRC3Q7RTR2 1065 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 TBC1D26Q86UD7 250 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 ODF3L1Q8IXM7 274 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 DRAM1Q8N682 238 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 BVESQ8NE79 360 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 OR8U1Q8NH10 309 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 ZFAND1Q8TCF1 268 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 RTN4IP1Q8WWV3 396 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 H1FXQ92522 213 aaKnown RBP5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 LEAP2Q969E1 77 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 PPP1R14BQ96C90 147 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 MSI2Q96DH6 328 aaKnown RBP5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 GALNT14Q96FL9 552 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF486Q96H40 463 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 SCGB3A2Q96PL1 93 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 PSMG3-AS1Q96PY0 264 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 CCL19Q99731 98 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 IFI27L2Q9H2X8 130 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 NARFLQ9H6Q4 476 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 PATZ1Q9HBE1 687 aaKnown RBP5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 OR2S2Q9NQN1 319 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 GFOD1Q9NXC2 390 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 IDI2-AS1Q9NZ38 188 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNRD1Q9P1U0 126 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 JPT1Q9UK76 154 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 RNF150Q9ULK6 438 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 UBE2J1Q9Y385 318 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 HELZ2Q9BYK8 2649 aaKnown RBP5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 CSMD2Q7Z408 3487 aa5.67□□□□□ -1.5
TOPBP1-203ENST00000503464 ARID1AO14497 2285 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 A0A0B4J2A0 478 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 A0A1W2PPE3 182 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 MPPED1O15442 326 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 PHF1O43189 567 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 YPEL1O60688 119 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 PGLYRP1O75594 196 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 OR2A4O95047 310 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 IFNA2P01563 188 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 HNRNPCP07910 306 aaKnown RBP eCLIP5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 PAX1P15863 534 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 GPR6P46095 362 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 NKX2-5P52952 324 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 DLX1P56177 255 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 TMEM33P57088 247 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 BRWD1-AS2P59051 145 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 LINC00205P59089 165 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 RPL30P62888 115 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 SRSF4Q08170 494 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 CT45A1Q5HYN5 189 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 HEPN1Q6WQI6 88 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 FAM185AQ8N0U4 392 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF645Q8N7E2 425 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF565Q8N9K5 539 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 LY6G5BQ8NDX9 201 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 OR11H4Q8NGC9 324 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 OR5M8Q8NGP6 311 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 CT45A3Q8NHU0 189 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 C8orf46Q8TAG6 207 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 GLYATL2Q8WU03 294 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 RAB1CQ92928 201 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 NEIL1Q96FI4 390 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 TIMD4Q96H15 378 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 ABHD14BQ96IU4 210 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 C18orf12Q96KH6 178 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF714Q96N38 554 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 YPEL2Q96QA6 119 aa5.66□□□□□ -1.5
TOPBP1-203ENST00000503464 OR2A7Q96R45 310 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms