RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 SPSB3Q6PJ21 355 aa10.52□□□□□ -0.73
AFF3-215ENST00000498090 FIP1L1Q6UN15 594 aaKnown RBP10.52□□□□□ -0.73
AFF3-215ENST00000498090 C1QL4Q86Z23 238 aa10.52□□□□□ -0.73
AFF3-215ENST00000498090 HS3ST6Q96QI5 342 aa10.52□□□□□ -0.73
AFF3-215ENST00000498090 C12orf57Q99622 126 aa10.52□□□□□ -0.73
AFF3-215ENST00000498090 PARD6GQ9BYG4 376 aaPredicted RBP10.52□□□□□ -0.73
AFF3-215ENST00000498090 ESRP2Q9H6T0 727 aaKnown RBP10.52□□□□□ -0.73
AFF3-215ENST00000498090 LIN7CQ9NUP9 197 aaKnown RBP10.52□□□□□ -0.73
AFF3-215ENST00000498090 CRIM1Q9NZV1 1036 aa10.52□□□□□ -0.73
AFF3-215ENST00000498090 TAAR3PQ9P1P4 343 aa10.52□□□□□ -0.73
AFF3-215ENST00000498090 ZNF835Q9Y2P0 537 aa10.52□□□□□ -0.73
AFF3-215ENST00000498090 CXorf65A6NEN9 183 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 C5orf52A6NGY3 159 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 FAM90A26D6RGX4 464 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 UBE2CO00762 179 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 HS3ST1O14792 307 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 WDR1O75083 606 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 SMIM6P0DI80 62 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 OMGP23515 440 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 WNT5AP41221 380 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 FOXG1P55316 489 aaPredicted RBP10.51□□□□□ -0.73
AFF3-215ENST00000498090 TGFBR3Q03167 851 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 EIF2S3LQ2VIR3 472 aaKnown RBP10.51□□□□□ -0.73
AFF3-215ENST00000498090 KHDC3LQ587J8 217 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 C1orf185Q5T7R7 199 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 Q6P435 159 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 GCNT2Q8N0V5 402 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 BATF2Q8N1L9 274 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 ZNF843Q8N446 348 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 ZBTB34Q8NCN2 500 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 PSMG3Q9BT73 122 aaPredicted RBP10.51□□□□□ -0.73
AFF3-215ENST00000498090 MAGT1Q9H0U3 335 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 IL36RNQ9UBH0 155 aa10.51□□□□□ -0.73
AFF3-215ENST00000498090 ERRFI1Q9UJM3 462 aaPredicted RBP10.51□□□□□ -0.73
AFF3-215ENST00000498090 MBD3L4A6NDZ8 208 aaPredicted RBP10.5□□□□□ -0.73
AFF3-215ENST00000498090 MBD3L3A6NE82 208 aaPredicted RBP10.5□□□□□ -0.73
AFF3-215ENST00000498090 MBD3L5A6NJ08 208 aaPredicted RBP10.5□□□□□ -0.73
AFF3-215ENST00000498090 TMEM210A6NLX4 147 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 HSPB6O14558 160 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 TMEM50AO95807 157 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 IL18BPO95998 194 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 IFNA17P01571 189 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 TUBG1P23258 451 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 PAX9P55771 341 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 ERVK11-1P61568 191 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 HBG1P69891 147 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 HBG2P69892 147 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 ZNF146Q15072 292 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 MSMO1Q15800 293 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 AKIRIN2Q53H80 203 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 ZNF497Q6ZNH5 498 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 DOLPP1Q86YN1 238 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 MBD3L2Q8NHZ7 208 aaPredicted RBP10.5□□□□□ -0.73
AFF3-215ENST00000498090 RNASE11Q8TAA1 199 aaKnown RBP10.5□□□□□ -0.73
AFF3-215ENST00000498090 SCGB1C1Q8TD33 95 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 RDH5Q92781 318 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 GPR146Q96CH1 333 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 GMPPAQ96IJ6 420 aaPredicted RBP10.5□□□□□ -0.73
AFF3-215ENST00000498090 SIRT7Q9NRC8 400 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 TUBG2Q9NRH3 451 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 METTL1Q9UBP6 276 aaKnown RBP10.5□□□□□ -0.73
AFF3-215ENST00000498090 TINAGQ9UJW2 476 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 WIPI2Q9Y4P8 454 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 B4DEV8 164 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 SH2D1BO14796 132 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 CST7O76096 145 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 S100A9P06702 114 aaKnown RBP10.5□□□□□ -0.73
AFF3-215ENST00000498090 OR13C7P0DN81 318 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 RAC2P15153 192 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 ZNF14P17017 642 aaPredicted RBP10.5□□□□□ -0.73
AFF3-215ENST00000498090 CA6P23280 308 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 SERF2P84101 59 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 FOXF2Q12947 444 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 KRBOX4Q5JUW0 171 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 SLC25A24Q6NUK1 477 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 C20orf204Q6ZNR8 217 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 SLC35E3Q7Z769 313 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 ODF3L1Q8IXM7 274 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 C2CD4CQ8TF44 421 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 MBNL3Q9NUK0 354 aaKnown RBP10.5□□□□□ -0.73
AFF3-215ENST00000498090 PRSS50Q9UI38 385 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 MMP24Q9Y5R2 645 aa10.5□□□□□ -0.73
AFF3-215ENST00000498090 ZNF462Q96JM2 2506 aa10.49□□□□□ -0.73
AFF3-215ENST00000498090 KIAA1324LA8MWY0 1029 aaPredicted RBP10.49□□□□□ -0.73
AFF3-215ENST00000498090 GPR37O15354 613 aa10.49□□□□□ -0.73
AFF3-215ENST00000498090 SYNGR2O43760 224 aa10.49□□□□□ -0.73
AFF3-215ENST00000498090 SCAF4O95104 1147 aaKnown RBP10.49□□□□□ -0.73
AFF3-215ENST00000498090 SRP19P09132 144 aaKnown RBP10.49□□□□□ -0.73
AFF3-215ENST00000498090 KIR2DL2P43627 348 aaPredicted RBP10.49□□□□□ -0.73
AFF3-215ENST00000498090 ASCL1P50553 236 aa10.49□□□□□ -0.73
AFF3-215ENST00000498090 OR2T2Q6IF00 324 aa10.49□□□□□ -0.73
AFF3-215ENST00000498090 MDP1Q86V88 176 aa10.49□□□□□ -0.73
AFF3-215ENST00000498090 ZFP82Q8N141 532 aa10.49□□□□□ -0.73
AFF3-215ENST00000498090 TMEM217Q8N7C4 229 aa10.49□□□□□ -0.73
AFF3-215ENST00000498090 PINX1Q96BK5 328 aaKnown RBP10.49□□□□□ -0.73
AFF3-215ENST00000498090 C12orf49Q9H741 205 aa10.49□□□□□ -0.73
AFF3-215ENST00000498090 CDH20Q9HBT6 801 aa10.49□□□□□ -0.73
AFF3-215ENST00000498090 TRAPPC2LQ9UL33 140 aa10.49□□□□□ -0.73
AFF3-215ENST00000498090 H3BQ15 152 aa10.48□□□□□ -0.73
AFF3-215ENST00000498090 SLC33A1O00400 549 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms