RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 RNF144BQ7Z419 303 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 ZNF596Q8TC21 504 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 TMEM222Q9H0R3 208 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 CHODLQ9H9P2 273 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 KBTBD11-OT1A0A1B0GTJ5 212 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 A0A1B0GU03 582 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 SHISA9B4DS77 424 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 C12orf77C9JDV5 145 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 GLIPR1P48060 266 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 F2RL1P55085 397 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 ZNF266Q14584 549 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 WDR86Q86TI4 376 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 RTN4RL2Q86UN3 420 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 ZNF709Q8N972 641 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 RFESDQ8TAC1 157 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 PPP1R1CQ8WVI7 109 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 RAB40CQ96S21 281 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 FAM212BQ9NTI7 297 aaPredicted RBP7.03□□□□□ -1.28
USP54-215ENST00000497106 FKBP11Q9NYL4 201 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 CRIM1Q9NZV1 1036 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 IL36RNQ9UBH0 155 aa7.03□□□□□ -1.28
USP54-215ENST00000497106 KIAA1549Q9HCM3 1950 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 H7C2Y5 167 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 TXNL1O43396 289 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 YPEL1O60688 119 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 SLC25A4P12235 298 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 MMP9P14780 707 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 LPAR6P43657 344 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 DAZAP2Q15038 168 aaPredicted RBP7.02□□□□□ -1.29
USP54-215ENST00000497106 TMEM155Q4W5P6 130 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 ZNF880Q6PDB4 577 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 PRSS54Q6PEW0 395 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 SPAG16Q8N0X2 631 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 OR1L1Q8NH94 360 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 MARC2Q969Z3 335 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 YPEL2Q96QA6 119 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 ONECUT1Q9UBC0 465 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 RCC1P18754 421 aaPredicted RBP7.02□□□□□ -1.29
USP54-215ENST00000497106 RAB11AP62491 216 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 GPR157Q5UAW9 335 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 DHRS7BQ6IAN0 325 aaPredicted RBP7.02□□□□□ -1.29
USP54-215ENST00000497106 LYG1Q8N1E2 194 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 BVESQ8NE79 360 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 OR11H7Q8NGC8 314 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 VSTM2AQ8TAG5 236 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 CBY1Q9Y3M2 126 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 SVILO95425 2214 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 ITGB1BP1O14713 200 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 TNFSF12O43508 249 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 IFNA17P01571 189 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 VMA21Q3ZAQ7 101 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 TOR2AQ5JU69 321 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.02□□□□□ -1.29
USP54-215ENST00000497106 RNF150Q9ULK6 438 aa7.02□□□□□ -1.29
USP54-215ENST00000497106 HLA-GP17693 338 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 EFNA4P52798 201 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 TMUB2Q71RG4 321 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 SLC35G3Q8N808 338 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 LSM10Q969L4 123 aaKnown RBP7.01□□□□□ -1.29
USP54-215ENST00000497106 KCNIP2Q9NS61 270 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 MBNL3Q9NUK0 354 aaKnown RBP7.01□□□□□ -1.29
USP54-215ENST00000497106 GFOD1Q9NXC2 390 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 A6NNC1 897 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 ENSAO43768 121 aaKnown RBP7.01□□□□□ -1.29
USP54-215ENST00000497106 LIPFP07098 398 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 PAX5Q02548 391 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 STUMQ69YW2 141 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 OR8H3Q8N146 312 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 TEX29Q8N6K0 151 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 C22orf15Q8WYQ4 148 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 IGHV3-43A0A0B4J1X8 118 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 FOXH1O75593 365 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 PGLYRP1O75594 196 aaPredicted RBP7.01□□□□□ -1.29
USP54-215ENST00000497106 HPRT1P00492 218 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 IGHV3-43DP0DP04 118 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 PPP1CCP36873 323 aaKnown RBP7.01□□□□□ -1.29
USP54-215ENST00000497106 HOXA1P49639 335 aaPredicted RBP7.01□□□□□ -1.29
USP54-215ENST00000497106 TLE4Q04727 773 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 RAB31Q13636 194 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 TMEM65Q6PI78 240 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 ZNF788Q6ZQV5 615 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 BIVMQ86UB2 503 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 OR52L2PQ8NGH6 319 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 TMEM186Q96B77 213 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 A0A1B0GWJ7 208 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 F8VVB4 439 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 F8VWA3 439 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 OR2A4O95047 310 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 PLGLAQ15195 96 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 CCDC144NLQ6NUI1 221 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 DMRTC2Q8IXT2 367 aaPredicted RBP7.01□□□□□ -1.29
USP54-215ENST00000497106 OR13A1Q8NGR1 328 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 OR9G1Q8NH87 305 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 TNFRSF14Q92956 283 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 OR2A7Q96R45 310 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 SPTA1P02549 2419 aa7.01□□□□□ -1.29
USP54-215ENST00000497106 FAM90A26D6RGX4 464 aa7□□□□□ -1.29
USP54-215ENST00000497106 MPC2O95563 127 aa7□□□□□ -1.29
USP54-215ENST00000497106 PRH1P02810 166 aa7□□□□□ -1.29
USP54-215ENST00000497106 SLC25A6P12236 298 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms