RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 SDHAF2Q9NX18 166 aa8.88□□□□□ -0.99
CLCN6-208ENST00000494028 DCAF16Q9NXF7 216 aa8.88□□□□□ -0.99
CLCN6-208ENST00000494028 RNF7Q9UBF6 113 aa8.88□□□□□ -0.99
CLCN6-208ENST00000494028 DUX4Q9UBX2 424 aa8.88□□□□□ -0.99
CLCN6-208ENST00000494028 PPP1R3CQ9UQK1 317 aa8.88□□□□□ -0.99
CLCN6-208ENST00000494028 IGHV3-43A0A0B4J1X8 118 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 C17orf100A8MU93 164 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 SHISA9B4DS77 424 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 I3L521 148 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 K7N7A8 449 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 TAAR5O14804 337 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 FGF16O43320 207 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 CYB5R3P00387 301 aaPredicted RBP8.87□□□□□ -0.99
CLCN6-208ENST00000494028 IGKV1-5P01602 117 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 OR4A8P0C604 315 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 IGHV3-43DP0DP04 118 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 CEACAM6P40199 344 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 NKX2-1P43699 371 aaPredicted RBP8.87□□□□□ -0.99
CLCN6-208ENST00000494028 CASP6P55212 293 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 CR1LQ2VPA4 569 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 ZNF585BQ52M93 769 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 NCMAPQ5T1S8 102 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 TEX36Q5VZQ5 186 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 TCF23Q7RTU1 214 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 TMED6Q8WW62 240 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 ARL11Q969Q4 196 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 C14orf79Q96F83 325 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 SDSLQ96GA7 329 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 WFIKKN1Q96NZ8 548 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 ZC4H2Q9NQZ6 224 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 PFDN2Q9UHV9 154 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 JPT1Q9UK76 154 aa8.87□□□□□ -0.99
CLCN6-208ENST00000494028 RBM7Q9Y580 266 aaKnown RBP8.87□□□□□ -0.99
CLCN6-208ENST00000494028 RP1L1Q8IWN7 2480 aaPredicted RBP8.86□□□□□ -0.99
CLCN6-208ENST00000494028 ARID1AO14497 2285 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 PIGBOS1A0A0B4J2F0 54 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 MEX3AA1L020 520 aaKnown RBP8.86□□□□□ -0.99
CLCN6-208ENST00000494028 IGSF23A1L1A6 192 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 RNF212BA8MTL3 300 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 TEX46H3BTG2 121 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 SSSCA1O60232 199 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 PITX3O75364 302 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 SERPINE2P07093 398 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 FGF2P09038 288 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 SLC25A6P12236 298 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 EPHA1P21709 976 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 POLR2GP62487 172 aaKnown RBP eCLIP8.86□□□□□ -0.99
CLCN6-208ENST00000494028 HTD2P86397 168 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 ADORA2A-AS1P86434 159 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 EWSR1Q01844 656 aaKnown RBP eCLIP8.86□□□□□ -0.99
CLCN6-208ENST00000494028 TLE1Q04724 770 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 HSD17B13Q7Z5P4 300 aaPredicted RBP8.86□□□□□ -0.99
CLCN6-208ENST00000494028 TGIF2LYQ8IUE0 185 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 ZNF295-AS1Q8N0V1 137 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 ZNF808Q8N4W9 903 aaPredicted RBP8.86□□□□□ -0.99
CLCN6-208ENST00000494028 ZNF561Q8N587 486 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 ZBTB34Q8NCN2 500 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 NINJ1Q92982 152 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 LSM10Q969L4 123 aaKnown RBP8.86□□□□□ -0.99
CLCN6-208ENST00000494028 GPR146Q96CH1 333 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 DIRC2Q96SL1 478 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 SMIM3Q9BZL3 60 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 NCOR1P1Q9H4R4 102 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 OR2S2Q9NQN1 319 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 CALYQ9NYX4 217 aa8.86□□□□□ -0.99
CLCN6-208ENST00000494028 KMT2BQ9UMN6 2715 aaPredicted RBP8.86□□□□□ -0.99
CLCN6-208ENST00000494028 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.85□□□□□ -0.99
CLCN6-208ENST00000494028 E7EQL1 145 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 F2RL2O00254 374 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 ST8SIA5O15466 376 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 SPINT2O43291 252 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 P0C879 139 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 MMP9P14780 707 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 ZP3P21754 424 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 CHRNB4P30926 498 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 TMEM33P57088 247 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 RPL30P62888 115 aaKnown RBP8.85□□□□□ -0.99
CLCN6-208ENST00000494028 EIF5AP63241 154 aaKnown RBP8.85□□□□□ -0.99
CLCN6-208ENST00000494028 Q3ZCU0 254 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 CXorf66Q5JRM2 361 aaPredicted RBP8.85□□□□□ -0.99
CLCN6-208ENST00000494028 FAM209AQ5JX71 171 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 GPR157Q5UAW9 335 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 ZNF788Q6ZQV5 615 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 ODF3L1Q8IXM7 274 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 FAM216BQ8N7L0 139 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 ZNRF1Q8ND25 227 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 FAM216AQ8WUB2 273 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 NEUROG1Q92886 237 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 RNASE6Q93091 150 aaKnown RBP8.85□□□□□ -0.99
CLCN6-208ENST00000494028 PLPPR2Q96GM1 343 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 ARV1Q9H2C2 271 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 PLEKHF2Q9H8W4 249 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 WFDC1Q9HC57 220 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 NGBQ9NPG2 151 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 LYRM2Q9NU23 88 aaPredicted RBP8.85□□□□□ -0.99
CLCN6-208ENST00000494028 CACNG5Q9UF02 275 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 PCNX1Q96RV3 2341 aa8.85□□□□□ -0.99
CLCN6-208ENST00000494028 A0A1B0GU03 582 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 NKX6-3A6NJ46 265 aa8.84□□□□□ -0.99
CLCN6-208ENST00000494028 KIAA1324LA8MWY0 1029 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms