RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 CDK2P24941 298 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 KDELR2P33947 212 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 OPRM1P35372 400 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 LINC00313P59037 77 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 DYNLL1P63167 89 aaKnown RBP1.24□□□□□ -2.21
SMC4-223ENST00000493695 KRTAP21-3Q3LHN1 58 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 TRMT12Q53H54 448 aaKnown RBP1.24□□□□□ -2.21
SMC4-223ENST00000493695 CLEC6AQ6EIG7 209 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 TCAIMQ8N3R3 496 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 OR51H1Q8NH63 302 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 ERMNQ8TAM6 284 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 TXNDC17Q9BRA2 123 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 ZNF471Q9BX82 626 aaPredicted RBP1.24□□□□□ -2.21
SMC4-223ENST00000493695 TREM1Q9NP99 234 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 MS4A12Q9NXJ0 267 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 CHMP5Q9NZZ3 219 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 LINC00527Q9UJ94 153 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 FIS1Q9Y3D6 152 aa1.24□□□□□ -2.21
SMC4-223ENST00000493695 A0A1W2PQL4 384 aaPredicted RBP1.23□□□□□ -2.21
SMC4-223ENST00000493695 DHRS12A0PJE2 317 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 C19orf71A6NCJ1 209 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 K7EQS6 105 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 CYTH3O43739 400 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 IGKV1-16P04430 117 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 CPMP14384 443 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 SYT1P21579 422 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 RWDD2BP57060 319 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 XRCC4Q13426 336 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 HES1Q14469 280 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 PDK2Q15119 407 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 MAPK14Q16539 360 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 TTC33Q6PID6 262 aaPredicted RBP1.23□□□□□ -2.21
SMC4-223ENST00000493695 DOLPP1Q86YN1 238 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 PLCZ1Q86YW0 608 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 OR11H1Q8NG94 326 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 OR52E4Q8NGH9 312 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 OR5AK3PQ8NH89 298 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 RNASE11Q8TAA1 199 aaKnown RBP1.23□□□□□ -2.21
SMC4-223ENST00000493695 TNFAIP8L1Q8WVP5 186 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 SLC19A3Q9BZV2 496 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 FAM206AQ9NX38 181 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 MINOS1-NBL1R4GNA1 71 aa1.23□□□□□ -2.21
SMC4-223ENST00000493695 LRPPRCP42704 1394 aaKnown RBP1.22□□□□□ -2.21
SMC4-223ENST00000493695 TMEM213A2RRL7 107 aa1.22□□□□□ -2.21
SMC4-223ENST00000493695 HSBP1L1C9JCN9 74 aa1.22□□□□□ -2.21
SMC4-223ENST00000493695 LIN7AO14910 233 aaPredicted RBP1.22□□□□□ -2.21
SMC4-223ENST00000493695 LY6HO94772 140 aa1.22□□□□□ -2.21
SMC4-223ENST00000493695 SOD1P00441 154 aa1.22□□□□□ -2.21
SMC4-223ENST00000493695 ARL14EPLP0DKL9 152 aa1.22□□□□□ -2.21
SMC4-223ENST00000493695 LPAR6P43657 344 aa1.22□□□□□ -2.21
SMC4-223ENST00000493695 PSMD7P51665 324 aa1.22□□□□□ -2.21
SMC4-223ENST00000493695 TSPEAR-AS2P59090 65 aa1.22□□□□□ -2.21
SMC4-223ENST00000493695 SLC35A2P78381 396 aa1.22□□□□□ -2.21
SMC4-223ENST00000493695 DEFA6Q01524 100 aa1.22□□□□□ -2.21
SMC4-223ENST00000493695 XKRXQ6PP77 449 aa1.22□□□□□ -2.21
SMC4-223ENST00000493695 SELENOHQ8IZQ5 122 aaKnown RBP1.22□□□□□ -2.21
SMC4-223ENST00000493695 Q9BRP9 147 aa1.22□□□□□ -2.21
SMC4-223ENST00000493695 CDCA4Q9BXL8 241 aa1.22□□□□□ -2.21
SMC4-223ENST00000493695 C1orf109Q9NX04 203 aa1.22□□□□□ -2.21
SMC4-223ENST00000493695 DSCAML1Q8TD84 2053 aa1.22□□□□□ -2.21
SMC4-223ENST00000493695 ATG2BQ96BY7 2078 aa1.21□□□□□ -2.22
SMC4-223ENST00000493695 OR1E2P47887 323 aa1.21□□□□□ -2.22
SMC4-223ENST00000493695 LGALS9CQ6DKI2 356 aa1.21□□□□□ -2.22
SMC4-223ENST00000493695 SLC13A5Q86YT5 568 aaPredicted RBP1.21□□□□□ -2.22
SMC4-223ENST00000493695 FNDC9Q8TBE3 224 aa1.21□□□□□ -2.22
SMC4-223ENST00000493695 CCDC12Q8WUD4 166 aaPredicted RBP1.21□□□□□ -2.22
SMC4-223ENST00000493695 ACY3Q96HD9 319 aa1.21□□□□□ -2.22
SMC4-223ENST00000493695 MED10Q9BTT4 135 aa1.21□□□□□ -2.22
SMC4-223ENST00000493695 MED18Q9BUE0 208 aa1.21□□□□□ -2.22
SMC4-223ENST00000493695 MED28Q9H204 178 aa1.21□□□□□ -2.22
SMC4-223ENST00000493695 OR51B6Q9H340 312 aa1.21□□□□□ -2.22
SMC4-223ENST00000493695 TXNL4BQ9NX01 149 aaKnown RBP1.21□□□□□ -2.22
SMC4-223ENST00000493695 NPATQ14207 1427 aa1.21□□□□□ -2.22
SMC4-223ENST00000493695 PRRC2BQ5JSZ5 2229 aaKnown RBP1.2□□□□□ -2.22
SMC4-223ENST00000493695 CHD2O14647 1828 aaKnown RBP1.2□□□□□ -2.22
SMC4-223ENST00000493695 ZNF638Q14966 1978 aaKnown RBP1.2□□□□□ -2.22
SMC4-223ENST00000493695 IGHV3-73A0A0B4J1V6 119 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 LINC00862A6NCI5 91 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 TRAPPC3O43617 180 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 NEMFO60524 1076 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 CD7P09564 240 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 ESDP10768 282 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 ORM2P19652 201 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 NPPCP23582 126 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 AGTR1P30556 359 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 HSPA9P38646 679 aaKnown RBP1.2□□□□□ -2.22
SMC4-223ENST00000493695 DAPP51397 102 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 ZNF140P52738 457 aaPredicted RBP1.2□□□□□ -2.22
SMC4-223ENST00000493695 TPRXLQ17RH7 258 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 CLEC12BQ2HXU8 276 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 FAM45BPQ6NSW5 357 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 RASL11AQ6T310 242 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 OR10A6Q8NH74 314 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 STOML3Q8TAV4 291 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 C16orf78Q8WTQ4 265 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 NRBP2Q9NSY0 501 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 PRO2289Q9P1D8 64 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 HHLA2Q9UM44 414 aa1.2□□□□□ -2.22
SMC4-223ENST00000493695 HELZ2Q9BYK8 2649 aaKnown RBP1.2□□□□□ -2.22
SMC4-223ENST00000493695 GBF1Q92538 1859 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms