RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 SUPT4H1P63272 117 aaKnown RBP10.4□□□□□ -0.74
VPS52-220ENST00000493674 PAX2Q02962 417 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 Q3ZCU0 254 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 MORN2Q502X0 79 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 METTL11BQ5VVY1 283 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 ZNF626Q68DY1 528 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 CLEC2AQ6UVW9 174 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 FAM185AQ8N0U4 392 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 OR10V1Q8NGI7 309 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 CAPSLQ8WWF8 208 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 TOMM40LQ969M1 308 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 PERPQ96FX8 193 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 SSBP3Q9BWW4 388 aaPredicted RBP10.4□□□□□ -0.74
VPS52-220ENST00000493674 OR2S2Q9NQN1 319 aa10.4□□□□□ -0.74
VPS52-220ENST00000493674 POLR3KQ9Y2Y1 108 aaPredicted RBP10.4□□□□□ -0.74
VPS52-220ENST00000493674 VPS13CQ709C8 3753 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 IGHV4-30-2A0A087WSY4 118 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 A0A096LNT2 108 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 IGHV3-43A0A0B4J1X8 118 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 OR4E1P0C645 316 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 TRAPPC2P0DI81 140 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 TRAPPC2BP0DI82 140 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 IGHV3-43DP0DP04 118 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 PGAM2P15259 253 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 PI3P19957 117 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 DNASE1P24855 282 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 LUMP51884 338 aaPredicted RBP10.39□□□□□ -0.75
VPS52-220ENST00000493674 GNB2P62879 340 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 DHRS2Q13268 280 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 PPP1R1AQ13522 171 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 EIF4EBP1Q13541 118 aaPredicted RBP10.39□□□□□ -0.75
VPS52-220ENST00000493674 DEFB113Q30KQ7 82 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 ESCO2Q56NI9 601 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 TMEM128Q5BJH2 165 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 UTF1Q5T230 341 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 PRAMEF5Q5TYX0 476 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 LPCAT3Q6P1A2 487 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 TMED4Q7Z7H5 227 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 C8orf31Q8N9H6 132 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 ZNF596Q8TC21 504 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 C5orf30Q96GV9 206 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 SEC22CQ9BRL7 303 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 AGMATQ9BSE5 352 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 BEX2Q9BXY8 128 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 SLC5A7Q9GZV3 580 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 OR51J1Q9H342 316 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 NARFLQ9H6Q4 476 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 BEX1Q9HBH7 125 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 SLC2A9Q9NRM0 540 aa10.39□□□□□ -0.75
VPS52-220ENST00000493674 C14orf166Q9Y224 244 aaKnown RBP10.39□□□□□ -0.75
VPS52-220ENST00000493674 ITPR3Q14573 2671 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 IGHV4-61A0A0C4DH41 118 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 CRYM-AS1A6NIL9 109 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 GPR31O00270 319 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 PHF1O43189 567 aaPredicted RBP10.38□□□□□ -0.75
VPS52-220ENST00000493674 RGS11O94810 467 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 OMGP23515 440 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 CD34P28906 385 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 CD276Q5ZPR3 534 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 ZNF818PQ6ZRF7 136 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 LYG2Q86SG7 212 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 KIR3DL3Q8N743 410 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 BVESQ8NE79 360 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 OR52B4Q8NGK2 314 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 ZNF431Q8TF32 576 aaPredicted RBP10.38□□□□□ -0.75
VPS52-220ENST00000493674 SECTM1Q8WVN6 248 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 EDARADDQ8WWZ3 215 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 RAB39BQ96DA2 213 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 GPN1Q9HCN4 374 aaPredicted RBP10.38□□□□□ -0.75
VPS52-220ENST00000493674 CCL28Q9NRJ3 127 aa10.38□□□□□ -0.75
VPS52-220ENST00000493674 PPIAL4CA0A0B4J2A2 164 aa10.37□□□□□ -0.75
VPS52-220ENST00000493674 C9orf170A2RU37 121 aa10.37□□□□□ -0.75
VPS52-220ENST00000493674 LIPFP07098 398 aa10.37□□□□□ -0.75
VPS52-220ENST00000493674 PPIAL4GP0DN37 164 aa10.37□□□□□ -0.75
VPS52-220ENST00000493674 SLC25A16P16260 332 aa10.37□□□□□ -0.75
VPS52-220ENST00000493674 ZFP36P26651 326 aaKnown RBP10.37□□□□□ -0.75
VPS52-220ENST00000493674 ZNF134P52741 427 aa10.37□□□□□ -0.75
VPS52-220ENST00000493674 PIGPP57054 158 aa10.37□□□□□ -0.75
VPS52-220ENST00000493674 RRAS2P62070 204 aaPredicted RBP10.37□□□□□ -0.75
VPS52-220ENST00000493674 KRTAP1-3Q8IUG1 177 aa10.37□□□□□ -0.75
VPS52-220ENST00000493674 ZNF645Q8N7E2 425 aa10.37□□□□□ -0.75
VPS52-220ENST00000493674 GALNT14Q96FL9 552 aa10.37□□□□□ -0.75
VPS52-220ENST00000493674 C1orf159Q96HA4 380 aa10.37□□□□□ -0.75
VPS52-220ENST00000493674 AKR1E2Q96JD6 320 aa10.37□□□□□ -0.75
VPS52-220ENST00000493674 FAM210AQ96ND0 272 aa10.37□□□□□ -0.75
VPS52-220ENST00000493674 IFI27L2Q9H2X8 130 aa10.37□□□□□ -0.75
VPS52-220ENST00000493674 GNG12Q9UBI6 72 aa10.37□□□□□ -0.75
VPS52-220ENST00000493674 GAB2Q9UQC2 676 aa10.37□□□□□ -0.75
VPS52-220ENST00000493674 TET2Q6N021 2002 aaPredicted RBP10.36□□□□□ -0.75
VPS52-220ENST00000493674 LOC105371242A0A075B767 164 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 A0A0B4J2A0 478 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 A0A1W2PPH5 198 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 HMX3A6NHT5 357 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 M0R1W7 72 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 SLC31A2O15432 143 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 CREBL2O60519 120 aaPredicted RBP10.36□□□□□ -0.75
VPS52-220ENST00000493674 SLC22A5O76082 557 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 SFT2D2O95562 160 aa10.36□□□□□ -0.75
VPS52-220ENST00000493674 DUS4LO95620 317 aaKnown RBP10.36□□□□□ -0.75
VPS52-220ENST00000493674 HLA-AP01891 365 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms