RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 VAMP1P23763 118 aa17.17■□□□□ 0.34
SND1-214ENST00000489417 RND3P61587 244 aa17.17■□□□□ 0.34
SND1-214ENST00000489417 LMO4P61968 165 aa17.17■□□□□ 0.34
SND1-214ENST00000489417 RRAS2P62070 204 aaPredicted RBP17.17■□□□□ 0.34
SND1-214ENST00000489417 CD276Q5ZPR3 534 aa17.17■□□□□ 0.34
SND1-214ENST00000489417 ZNF818PQ6ZRF7 136 aa17.17■□□□□ 0.34
SND1-214ENST00000489417 FAM216AQ8WUB2 273 aa17.17■□□□□ 0.34
SND1-214ENST00000489417 RAB39BQ96DA2 213 aa17.17■□□□□ 0.34
SND1-214ENST00000489417 MED28Q9H204 178 aa17.17■□□□□ 0.34
SND1-214ENST00000489417 LOC105371242A0A075B767 164 aa17.16■□□□□ 0.34
SND1-214ENST00000489417 CRYM-AS1A6NIL9 109 aa17.16■□□□□ 0.34
SND1-214ENST00000489417 SSNA1O43805 119 aa17.16■□□□□ 0.34
SND1-214ENST00000489417 TRAPPC2P0DI81 140 aa17.16■□□□□ 0.34
SND1-214ENST00000489417 TRAPPC2BP0DI82 140 aa17.16■□□□□ 0.34
SND1-214ENST00000489417 LY6G6FQ5SQ64 297 aa17.16■□□□□ 0.34
SND1-214ENST00000489417 OR2AK2Q8NG84 335 aa17.16■□□□□ 0.34
SND1-214ENST00000489417 HELZ2Q9BYK8 2649 aaKnown RBP17.16■□□□□ 0.34
SND1-214ENST00000489417 IGHV4-30-2A0A087WSY4 118 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 TEX13DA0A0J9YY54 714 aaPredicted RBP17.15■□□□□ 0.34
SND1-214ENST00000489417 C17orf98A8MV24 154 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 KIAA1324LA8MWY0 1029 aaPredicted RBP17.15■□□□□ 0.34
SND1-214ENST00000489417 ITGB1BP1O14713 200 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 PFDN1O60925 122 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 SFT2D2O95562 160 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 LIPFP07098 398 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 ERVFRD-1P60508 538 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 SUPT4H1P63272 117 aaKnown RBP17.15■□□□□ 0.34
SND1-214ENST00000489417 DEFB113Q30KQ7 82 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 C11orf88Q6PI97 169 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 SGPP2Q8IWX5 399 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 CMTM1Q8IZ96 169 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 RTN4IP1Q8WWV3 396 aaPredicted RBP17.15■□□□□ 0.34
SND1-214ENST00000489417 LEAP2Q969E1 77 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 AKR1E2Q96JD6 320 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 OR2D2Q9H210 308 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 NAA60Q9H7X0 242 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 RNF150Q9ULK6 438 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 PSG11Q9UQ72 335 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 DOPEY2Q9Y3R5 2298 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 FBN2P35556 2912 aa17.15■□□□□ 0.34
SND1-214ENST00000489417 AKAP6Q13023 2319 aa17.14■□□□□ 0.33
SND1-214ENST00000489417 ST8SIA5O15466 376 aa17.14■□□□□ 0.33
SND1-214ENST00000489417 S100GP29377 79 aa17.14■□□□□ 0.33
SND1-214ENST00000489417 CLEC12BQ2HXU8 276 aa17.14■□□□□ 0.33
SND1-214ENST00000489417 UTF1Q5T230 341 aa17.14■□□□□ 0.33
SND1-214ENST00000489417 LRRC75A-AS1Q8N1F1 130 aa17.14■□□□□ 0.33
SND1-214ENST00000489417 ZNF645Q8N7E2 425 aa17.14■□□□□ 0.33
SND1-214ENST00000489417 BVESQ8NE79 360 aa17.14■□□□□ 0.33
SND1-214ENST00000489417 CASTOR1Q8WTX7 329 aa17.14■□□□□ 0.33
SND1-214ENST00000489417 IGHV4-61A0A0C4DH41 118 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 A8MXK9 166 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 SLC22A5O76082 557 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 IGLV2-14P01704 120 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 IGHV3-7P01780 117 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 RBP4P02753 201 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 RAB7AP51149 207 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 FCN2Q15485 313 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 SLC9A3R2Q15599 337 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 MSMO1Q15800 293 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 C12orf45Q8N5I9 185 aaPredicted RBP17.13■□□□□ 0.33
SND1-214ENST00000489417 C11orf42Q8N5U0 333 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 ZNF439Q8NDP4 499 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 ABHD14AQ9BUJ0 271 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 SUCNR1Q9BXA5 334 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 SESN1Q9Y6P5 492 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 BAHCC1Q9P281 2608 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 SLC31A2O15432 143 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 MPPED1O15442 326 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 DUS4LO95620 317 aaKnown RBP17.13■□□□□ 0.33
SND1-214ENST00000489417 IGHV1-8P0DP01 117 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 ZFP36P26651 326 aaKnown RBP17.13■□□□□ 0.33
SND1-214ENST00000489417 CD34P28906 385 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 ZNF134P52741 427 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 TBC1D26Q86UD7 250 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 DRAM1Q8N682 238 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 ZBTB34Q8NCN2 500 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 MITD1Q8WV92 249 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 MBD6Q96DN6 1003 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 AGMATQ9BSE5 352 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 ONECUT1Q9UBC0 465 aa17.13■□□□□ 0.33
SND1-214ENST00000489417 PGLYRP1O75594 196 aaPredicted RBP17.12■□□□□ 0.33
SND1-214ENST00000489417 IFNA2P01563 188 aa17.12■□□□□ 0.33
SND1-214ENST00000489417 SLC25A16P16260 332 aa17.12■□□□□ 0.33
SND1-214ENST00000489417 GNG10P50151 68 aa17.12■□□□□ 0.33
SND1-214ENST00000489417 Q3ZCU0 254 aa17.12■□□□□ 0.33
SND1-214ENST00000489417 CT45A1Q5HYN5 189 aa17.12■□□□□ 0.33
SND1-214ENST00000489417 UXS1Q8NBZ7 420 aa17.12■□□□□ 0.33
SND1-214ENST00000489417 CT45A3Q8NHU0 189 aa17.12■□□□□ 0.33
SND1-214ENST00000489417 GALNT14Q96FL9 552 aa17.12■□□□□ 0.33
SND1-214ENST00000489417 ABHD14BQ96IU4 210 aa17.12■□□□□ 0.33
SND1-214ENST00000489417 PHB2Q99623 299 aa17.12■□□□□ 0.33
SND1-214ENST00000489417 NEURL2Q9BR09 285 aa17.12■□□□□ 0.33
SND1-214ENST00000489417 IFI27L2Q9H2X8 130 aa17.12■□□□□ 0.33
SND1-214ENST00000489417 KCNIP3Q9Y2W7 256 aa17.12■□□□□ 0.33
SND1-214ENST00000489417 CRYBG3Q68DQ2 2970 aa17.11■□□□□ 0.33
SND1-214ENST00000489417 hCG_1809904A0A1W2PP81 198 aa17.11■□□□□ 0.33
SND1-214ENST00000489417 A0A1W2PPE2 198 aa17.11■□□□□ 0.33
SND1-214ENST00000489417 A0A1W2PPE3 182 aa17.11■□□□□ 0.33
SND1-214ENST00000489417 A0A1W2PR64 198 aa17.11■□□□□ 0.33
SND1-214ENST00000489417 A0A1W2PRV1 198 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms