RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 CEACAM8P31997 349 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-207ENST00000489357 NKX2-1P43699 371 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-207ENST00000489357 F2RL1P55085 397 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 TMEM33P57088 247 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 SP6Q3SY56 376 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 BEX5Q5H9J7 111 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 SPATA46Q5T0L3 261 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 SEM1Q6ZVN7 128 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 MYPOPQ86VE0 399 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-207ENST00000489357 FAM219AQ8IW50 185 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 SELENOHQ8IZQ5 122 aaKnown RBP7.12□□□□□ -1.27
VTI1A-207ENST00000489357 ZNF610Q8N9Z0 462 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 RELL2Q8NC24 303 aaPredicted RBP7.12□□□□□ -1.27
VTI1A-207ENST00000489357 LYPD6BQ8NI32 183 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 PPP1R35Q8TAP8 253 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 RDH5Q92781 318 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 GALMQ96C23 342 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 MUCL1Q96DR8 90 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 LURAP1Q96LR2 239 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 VKORC1Q9BQB6 163 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 GINS3Q9BRX5 216 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 HIPK2Q9H2X6 1198 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 PLEKHF2Q9H8W4 249 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 PARP11Q9NR21 331 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 COA4Q9NYJ1 87 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 PRR13Q9NZ81 148 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 CACFD1Q9UGQ2 172 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 TRAPPC2LQ9UL33 140 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 LAMP3Q9UQV4 416 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 STRAPQ9Y3F4 350 aaKnown RBP7.12□□□□□ -1.27
VTI1A-207ENST00000489357 FAM215AQ9Y5M1 114 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 HECTD1Q9ULT8 2610 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 COL12A1Q99715 3063 aa7.12□□□□□ -1.27
VTI1A-207ENST00000489357 UMAD1C9J7I0 102 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 FAM90A26D6RGX4 464 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 PRRG2O14669 202 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 MLNRO43193 412 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 SERPINE2P07093 398 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 GLRXP35754 106 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 CASP6P55212 293 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 TAS2R30P59541 319 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 ADORA2A-AS1P86434 159 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 PJVKQ0ZLH3 352 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 PDCD1Q15116 288 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 TMEM30BQ3MIR4 351 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 FAM74A1Q5RGS3 127 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 ACP7Q6ZNF0 438 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 MRGPRGQ86SM5 289 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 OR2C3Q8N628 320 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 OR11L1Q8NGX0 322 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 LHFPL5Q8TAF8 219 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 TMED6Q8WW62 240 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 ERGIC1Q969X5 290 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 CYYR1Q96J86 154 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 RAB40CQ96S21 281 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 SMDT1Q9H4I9 107 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 C11orf1Q9H5F2 150 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 LYRM2Q9NU23 88 aaPredicted RBP7.11□□□□□ -1.27
VTI1A-207ENST00000489357 ELOVL5Q9NYP7 299 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 IL36RNQ9UBH0 155 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 FBXL17Q9UF56 701 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 TINAGQ9UJW2 476 aa7.11□□□□□ -1.27
VTI1A-207ENST00000489357 LSM5Q9Y4Y9 91 aaKnown RBP7.11□□□□□ -1.27
VTI1A-207ENST00000489357 IGLV3-9A0A075B6K5 115 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 IGKV1D-13A0A0B4J2D9 117 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 A1L4Q6 167 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 ZNF705EA8MWA4 302 aaPredicted RBP7.1□□□□□ -1.27
VTI1A-207ENST00000489357 HSPA12AO43301 675 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 PITX3O75364 302 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 ADH4P08319 380 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 IGKV1-13P0DP09 117 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 SPP1P10451 314 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 RCC1P18754 421 aaPredicted RBP7.1□□□□□ -1.27
VTI1A-207ENST00000489357 ATF4P18848 351 aaPredicted RBP7.1□□□□□ -1.27
VTI1A-207ENST00000489357 MPV17P39210 176 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 CAV2P51636 162 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 ARHGDIBP52566 201 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 SELENOVP59797 346 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 HTD2P86397 168 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 FOXF2Q12947 444 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 CR1LQ2VPA4 569 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 MIDNQ504T8 468 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 C10orf91Q5T1B1 145 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 RPL7L1Q6DKI1 246 aaKnown RBP7.1□□□□□ -1.27
VTI1A-207ENST00000489357 HIST2H2BCQ6DN03 193 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 WDR82Q6UXN9 313 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 MEX3BQ6ZN04 569 aaKnown RBP7.1□□□□□ -1.27
VTI1A-207ENST00000489357 C11orf53Q8IXP5 236 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 SVBPQ8N300 66 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 RPRMLQ8N4K4 120 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 ZNF645Q8N7E2 425 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 LFNGQ8NES3 379 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 DMBX1Q8NFW5 382 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 OR1S2Q8NGQ3 325 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 PCNPQ8WW12 178 aaKnown RBP7.1□□□□□ -1.27
VTI1A-207ENST00000489357 ITLN2Q8WWU7 325 aaPredicted RBP7.1□□□□□ -1.27
VTI1A-207ENST00000489357 GNPNAT1Q96EK6 184 aaPredicted RBP7.1□□□□□ -1.27
VTI1A-207ENST00000489357 CCDC120Q96HB5 630 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 ZNF488Q96MN9 340 aa7.1□□□□□ -1.27
VTI1A-207ENST00000489357 LINC00052Q96N35 136 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms