RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 TMEM11P17152 192 aa12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 CD1BP29016 333 aa12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 VDAC2P45880 294 aaPredicted RBP12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 MOB1BQ7L9L4 216 aa12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 C5orf56Q8N8D9 126 aa12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 PTX4Q96A99 478 aa12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 RBMXL1Q96E39 390 aaKnown RBP12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 ABHD14AQ9BUJ0 271 aa12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 RNF167Q9H6Y7 350 aa12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 C12orf4Q9NQ89 552 aa12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 PLSCR3Q9NRY6 295 aa12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 ABRACLQ9P1F3 81 aa12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 MOB4Q9Y3A3 225 aa12.67□□□□□ -0.38
CTDSP1-209ENST00000488627 CD36P16671 472 aa12.66□□□□□ -0.38
CTDSP1-209ENST00000488627 GADD45AP24522 165 aa12.66□□□□□ -0.38
CTDSP1-209ENST00000488627 HES1Q14469 280 aa12.66□□□□□ -0.38
CTDSP1-209ENST00000488627 TGIF2LXQ8IUE1 241 aa12.66□□□□□ -0.38
CTDSP1-209ENST00000488627 LYG1Q8N1E2 194 aa12.66□□□□□ -0.38
CTDSP1-209ENST00000488627 OR10R2Q8NGX6 335 aa12.66□□□□□ -0.38
CTDSP1-209ENST00000488627 SETD6Q8TBK2 473 aa12.66□□□□□ -0.38
CTDSP1-209ENST00000488627 IL1F10Q8WWZ1 152 aa12.66□□□□□ -0.38
CTDSP1-209ENST00000488627 RAB3CQ96E17 227 aa12.66□□□□□ -0.38
CTDSP1-209ENST00000488627 CMSS1Q9BQ75 279 aaKnown RBP12.66□□□□□ -0.38
CTDSP1-209ENST00000488627 CHCHD6Q9BRQ6 235 aa12.66□□□□□ -0.38
CTDSP1-209ENST00000488627 PARP12Q9H0J9 701 aaKnown RBP12.66□□□□□ -0.38
CTDSP1-209ENST00000488627 IFI27L2Q9H2X8 130 aa12.66□□□□□ -0.38
CTDSP1-209ENST00000488627 MMP27Q9H306 513 aa12.66□□□□□ -0.38
CTDSP1-209ENST00000488627 VWFP04275 2813 aa12.66□□□□□ -0.38
CTDSP1-209ENST00000488627 CMYA5Q8N3K9 4069 aa12.66□□□□□ -0.38
CTDSP1-209ENST00000488627 IGKV1-6A0A0C4DH72 117 aa12.65□□□□□ -0.38
CTDSP1-209ENST00000488627 ADARB2-AS1A8MUL3 147 aa12.65□□□□□ -0.38
CTDSP1-209ENST00000488627 MFNGO00587 321 aa12.65□□□□□ -0.38
CTDSP1-209ENST00000488627 FGF16O43320 207 aa12.65□□□□□ -0.38
CTDSP1-209ENST00000488627 RGS11O94810 467 aa12.65□□□□□ -0.38
CTDSP1-209ENST00000488627 SCTP09683 121 aa12.65□□□□□ -0.38
CTDSP1-209ENST00000488627 CLEC2LP0C7M8 214 aa12.65□□□□□ -0.38
CTDSP1-209ENST00000488627 SDC2P34741 201 aa12.65□□□□□ -0.38
CTDSP1-209ENST00000488627 HLA-DRB3P79483 266 aa12.65□□□□□ -0.38
CTDSP1-209ENST00000488627 KCTD7Q96MP8 289 aa12.65□□□□□ -0.38
CTDSP1-209ENST00000488627 AGMATQ9BSE5 352 aa12.65□□□□□ -0.38
CTDSP1-209ENST00000488627 CENPOQ9BU64 300 aa12.65□□□□□ -0.38
CTDSP1-209ENST00000488627 MGAT4AQ9UM21 535 aa12.65□□□□□ -0.38
CTDSP1-209ENST00000488627 TRIM64CA6NLI5 447 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 ITGB1BP1O14713 200 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 TXNL1O43396 289 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 FBXO24O75426 580 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 HIST1H1DP16402 221 aaKnown RBP12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 GNB3P16520 340 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 OR3A3P47888 321 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 CD83Q01151 205 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 LSAMPQ13449 338 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 C2orf68Q2NKX9 166 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 ARSJQ5FYB0 599 aaPredicted RBP12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 TCTEX1D4Q5JR98 221 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 SFXN4Q6P4A7 337 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 ZNF833PQ6ZTB9 187 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 Q8N9W7 124 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 TSPAN14Q8NG11 270 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 OR5AU1Q8NGC0 362 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 OR2T10Q8NGZ9 312 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 CITED2Q99967 270 aaPredicted RBP12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 ZNF251Q9BRH9 671 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 OR1A1Q9P1Q5 309 aa12.64□□□□□ -0.39
CTDSP1-209ENST00000488627 A0A087WXM4 84 aa12.63□□□□□ -0.39
CTDSP1-209ENST00000488627 TRDCB7Z8K6 153 aa12.63□□□□□ -0.39
CTDSP1-209ENST00000488627 ST8SIA5O15466 376 aa12.63□□□□□ -0.39
CTDSP1-209ENST00000488627 PEX14O75381 377 aa12.63□□□□□ -0.39
CTDSP1-209ENST00000488627 TNFAIP8O95379 198 aa12.63□□□□□ -0.39
CTDSP1-209ENST00000488627 MOSP00540 346 aa12.63□□□□□ -0.39
CTDSP1-209ENST00000488627 CSF1P09603 554 aa12.63□□□□□ -0.39
CTDSP1-209ENST00000488627 SNRPBP14678 240 aaKnown RBP12.63□□□□□ -0.39
CTDSP1-209ENST00000488627 C10orf99Q6UWK7 81 aa12.63□□□□□ -0.39
CTDSP1-209ENST00000488627 OR2AK2Q8NG84 335 aa12.63□□□□□ -0.39
CTDSP1-209ENST00000488627 NABP2Q9BQ15 211 aa12.63□□□□□ -0.39
CTDSP1-209ENST00000488627 MRPL20Q9BYC9 149 aaKnown RBP12.63□□□□□ -0.39
CTDSP1-209ENST00000488627 SLC23A1Q9UHI7 598 aa12.63□□□□□ -0.39
CTDSP1-209ENST00000488627 DAPK2Q9UIK4 370 aa12.63□□□□□ -0.39
CTDSP1-209ENST00000488627 ELF5Q9UKW6 265 aaPredicted RBP12.63□□□□□ -0.39
CTDSP1-209ENST00000488627 SAA2-SAA4A0A096LPE2 208 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 LOC100506127A0A0U1RQW1 187 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 METTL21EPA6NDL7 271 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 LINC01548A6NM66 108 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 SERPINE3A8MV23 424 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 PROP1O75360 226 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 IGHG2P01859 326 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 FCGR3AP08637 254 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 CD3GP09693 182 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 SAA2P0DJI9 122 aaPredicted RBP12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 ZBTB25P24278 435 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 CEACAM6P40199 344 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 F2RL1P55085 397 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 MXD1Q05195 221 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 C9orf152Q5JTZ5 239 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 CENPVQ7Z7K6 275 aaPredicted RBP12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 NDUFA11Q86Y39 141 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 FAM110DQ8TAY7 271 aaPredicted RBP12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 YIPF6Q96EC8 236 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 RITA1Q96K30 269 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 TOLLIPQ9H0E2 274 aa12.62□□□□□ -0.39
CTDSP1-209ENST00000488627 C11orf54Q9H0W9 315 aaPredicted RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms