RNA–Protein interactions for RNA: ENST00000488543.1

HDAC6-230, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-230ENST00000488543 RIMS4Q9H426 269 aaPredicted RBP10.21□□□□□ -0.77
HDAC6-230ENST00000488543 WFDC1Q9HC57 220 aa10.21□□□□□ -0.77
HDAC6-230ENST00000488543 NDRG3Q9UGV2 375 aa10.21□□□□□ -0.77
HDAC6-230ENST00000488543 RCL1Q9Y2P8 373 aaKnown RBP10.21□□□□□ -0.77
HDAC6-230ENST00000488543 KMT2BQ9UMN6 2715 aaPredicted RBP10.21□□□□□ -0.78
HDAC6-230ENST00000488543 IGKV1-6A0A0C4DH72 117 aa10.21□□□□□ -0.78
HDAC6-230ENST00000488543 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.21□□□□□ -0.78
HDAC6-230ENST00000488543 MBPP02686 304 aaPredicted RBP10.21□□□□□ -0.78
HDAC6-230ENST00000488543 CEBPDP49716 269 aaPredicted RBP10.21□□□□□ -0.78
HDAC6-230ENST00000488543 PPT1P50897 306 aa10.21□□□□□ -0.78
HDAC6-230ENST00000488543 CAV2P51636 162 aa10.21□□□□□ -0.78
HDAC6-230ENST00000488543 F2RL1P55085 397 aa10.21□□□□□ -0.78
HDAC6-230ENST00000488543 SHEQ5VZ18 495 aa10.21□□□□□ -0.78
HDAC6-230ENST00000488543 DHRS7BQ6IAN0 325 aaPredicted RBP10.21□□□□□ -0.78
HDAC6-230ENST00000488543 ACP7Q6ZNF0 438 aa10.21□□□□□ -0.78
HDAC6-230ENST00000488543 SGPP2Q8IWX5 399 aa10.21□□□□□ -0.78
HDAC6-230ENST00000488543 NUP37Q8NFH4 326 aa10.21□□□□□ -0.78
HDAC6-230ENST00000488543 OR52M1Q8NGK5 317 aa10.21□□□□□ -0.78
HDAC6-230ENST00000488543 MOB3AQ96BX8 217 aa10.21□□□□□ -0.78
HDAC6-230ENST00000488543 SMIM8Q96KF7 97 aa10.21□□□□□ -0.78
HDAC6-230ENST00000488543 C1orf123Q9NWV4 160 aa10.21□□□□□ -0.78
HDAC6-230ENST00000488543 MEX3AA1L020 520 aaKnown RBP10.2□□□□□ -0.78
HDAC6-230ENST00000488543 CRYM-AS1A6NIL9 109 aa10.2□□□□□ -0.78
HDAC6-230ENST00000488543 TRDCB7Z8K6 153 aa10.2□□□□□ -0.78
HDAC6-230ENST00000488543 NXPH3O95157 252 aa10.2□□□□□ -0.78
HDAC6-230ENST00000488543 HAND1O96004 215 aa10.2□□□□□ -0.78
HDAC6-230ENST00000488543 AADACP22760 399 aa10.2□□□□□ -0.78
HDAC6-230ENST00000488543 RPS23P62266 143 aaKnown RBP10.2□□□□□ -0.78
HDAC6-230ENST00000488543 TMEM268Q5VZI3 342 aa10.2□□□□□ -0.78
HDAC6-230ENST00000488543 SPAG16Q8N0X2 631 aa10.2□□□□□ -0.78
HDAC6-230ENST00000488543 GAPTQ8N292 157 aa10.2□□□□□ -0.78
HDAC6-230ENST00000488543 ZDHHC8Q9ULC8 765 aa10.2□□□□□ -0.78
HDAC6-230ENST00000488543 ATP23Q9Y6H3 246 aa10.2□□□□□ -0.78
HDAC6-230ENST00000488543 SH2D1BO14796 132 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 DEDDO75618 318 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 ZNF616Q08AN1 781 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 NCMAPQ5T1S8 102 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 MEX3BQ6ZN04 569 aaKnown RBP10.19□□□□□ -0.78
HDAC6-230ENST00000488543 DMRTC2Q8IXT2 367 aaPredicted RBP10.19□□□□□ -0.78
HDAC6-230ENST00000488543 ZCCHC24Q8N2G6 241 aaKnown RBP10.19□□□□□ -0.78
HDAC6-230ENST00000488543 SEC11CQ9BY50 192 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 TREM2Q9NZC2 230 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 TAAR3PQ9P1P4 343 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 HCFC1P51610 2035 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 SHISA9B4DS77 424 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 C19orf84I3L1E1 186 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 SNAPINO95295 136 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 CLDN14O95500 239 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 RNF224P0DH78 156 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 ZNF728P0DKX0 622 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 EGR1P18146 543 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 LMO1P25800 156 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 MDH2P40926 338 aaKnown RBP10.19□□□□□ -0.78
HDAC6-230ENST00000488543 GLP1RP43220 463 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 UCP3P55916 312 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 MZT1Q08AG7 82 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 BTNL8Q6UX41 500 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 IL34Q6ZMJ4 242 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 ZNF497Q6ZNH5 498 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 OR5T2Q8NGG2 359 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 MEGF10Q96KG7 1140 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 CLCC1Q96S66 551 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 CRYBG3Q68DQ2 2970 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 CACNA1DQ01668 2161 aa10.19□□□□□ -0.78
HDAC6-230ENST00000488543 KIR2DS1A0A191URI9 304 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-230ENST00000488543 PSPNO60542 156 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 TFF1P04155 84 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 H2AFB1P0C5Y9 115 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 PET100P0DJ07 73 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 KIR2DS4P43632 304 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 SULT1A2P50226 295 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 RAB13P51153 203 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 HLA-DRB3P79483 266 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 NHLH2Q02577 135 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 KIR2DS1Q14954 304 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 ADIPOQQ15848 244 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 ABCA11PQ4W5N1 156 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 HSD17B11Q8NBQ5 300 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 LRRC29Q8WV35 223 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 RTN4IP1Q8WWV3 396 aaPredicted RBP10.18□□□□□ -0.78
HDAC6-230ENST00000488543 ISOC2Q96AB3 205 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 ZFP57Q9NU63 452 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 DNAJB11Q9UBS4 358 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 OR14J1Q9UGF5 321 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 SPRY3O43610 288 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 TUSC2O75896 110 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 PPYP01298 95 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 OR4A8P0C604 315 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 MIDNQ504T8 468 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 SSX8Q7RTT4 187 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 OR2V2Q96R30 315 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 RSRP1Q9BUV0 290 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 NGBQ9NPG2 151 aa10.18□□□□□ -0.78
HDAC6-230ENST00000488543 TRAV39A0A0B4J263 110 aa10.17□□□□□ -0.78
HDAC6-230ENST00000488543 FAM157AC9JC47 383 aa10.17□□□□□ -0.78
HDAC6-230ENST00000488543 E7EQL1 145 aa10.17□□□□□ -0.78
HDAC6-230ENST00000488543 SMAD7O15105 426 aaKnown RBP10.17□□□□□ -0.78
HDAC6-230ENST00000488543 CFHR2P36980 270 aa10.17□□□□□ -0.78
HDAC6-230ENST00000488543 TMEM187Q14656 261 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms