RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 MORN2Q502X0 79 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 C6orf183Q5T699 404 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 ZNF562Q6V9R5 426 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 SERPINA12Q8IW75 414 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 OR51A4Q8NGJ6 313 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 OR4K15Q8NH41 348 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 OR52N1Q8NH53 320 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 GRPEL2Q8TAA5 225 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 TMEM163Q8TC26 289 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 IL4I1Q96RQ9 567 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 S100A13Q99584 98 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 ABHD14AQ9BUJ0 271 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 KRTAP4-5Q9BYR2 181 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 OR2S2Q9NQN1 319 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 FRRS1LQ9P0K9 344 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 ZNF581Q9P0T4 197 aa6.96□□□□□ -1.3
COL17A1-207ENST00000488320 WARS2Q9UGM6 360 aaKnown RBP6.96□□□□□ -1.3
COL17A1-207ENST00000488320 H3BUA1 57 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 H7C2Y5 167 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 GEMIN2O14893 280 aaKnown RBP6.95□□□□□ -1.3
COL17A1-207ENST00000488320 XRCC3O43542 346 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 CA2P00918 260 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 TRBV12-3P01733 135 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 IFNA4P05014 189 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 OR3A3P47888 321 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 DEFB114Q30KQ6 69 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 FAM131AQ6UXB0 335 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 ZNF497Q6ZNH5 498 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 WFDC3Q8IUB2 231 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 BVESQ8NE79 360 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 OR52L2PQ8NGH6 319 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 SNAPC3Q92966 411 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 METTL9Q9H1A3 318 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 NDE1Q9NXR1 346 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 METTL1Q9UBP6 276 aaKnown RBP6.95□□□□□ -1.3
COL17A1-207ENST00000488320 ENOPH1Q9UHY7 261 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 DNAH17Q9UFH2 4485 aa6.95□□□□□ -1.3
COL17A1-207ENST00000488320 DNAH2Q9P225 4427 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 MCRIP1C9JLW8 97 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 GABRPO00591 440 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 SLC22A1O15245 554 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 CDRT1O95170 752 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 FADS2O95864 444 aaKnown RBP6.94□□□□□ -1.3
COL17A1-207ENST00000488320 LGALS7P47929 136 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 ALDH3A2P51648 485 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 NANOS3P60323 173 aaKnown RBP6.94□□□□□ -1.3
COL17A1-207ENST00000488320 ADARB1P78563 741 aaKnown RBP6.94□□□□□ -1.3
COL17A1-207ENST00000488320 DEFA5Q01523 94 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 ALKBH1Q13686 389 aaKnown RBP6.94□□□□□ -1.3
COL17A1-207ENST00000488320 FXYD3Q14802 87 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 C6orf141Q5SZD1 244 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 ZNF343Q6P1L6 599 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 TRAT1Q6PIZ9 186 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 ZNF833PQ6ZTB9 187 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 ODF3L1Q8IXM7 274 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 OR52B4Q8NGK2 314 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 RNF183Q96D59 192 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 WDR89Q96FK6 387 aaPredicted RBP6.94□□□□□ -1.3
COL17A1-207ENST00000488320 ELAC2Q9BQ52 826 aaKnown RBP6.94□□□□□ -1.3
COL17A1-207ENST00000488320 PARP12Q9H0J9 701 aaKnown RBP6.94□□□□□ -1.3
COL17A1-207ENST00000488320 IFT22Q9H7X7 185 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 TAF9BQ9HBM6 251 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 KCNIP1Q9NZI2 227 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 TP53TG1Q9Y2A0 90 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 DYNC1H1Q14204 4646 aaKnown RBP6.94□□□□□ -1.3
COL17A1-207ENST00000488320 PKHD1P08F94 4074 aa6.94□□□□□ -1.3
COL17A1-207ENST00000488320 FAT2Q9NYQ8 4349 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 RCC1P18754 421 aaPredicted RBP6.93□□□□□ -1.3
COL17A1-207ENST00000488320 ATF4P18848 351 aaPredicted RBP6.93□□□□□ -1.3
COL17A1-207ENST00000488320 RAB3AP20336 220 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 SERPINA2P20848 420 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 FASP25445 335 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 MC5RP33032 325 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 PPP1CCP36873 323 aaKnown RBP6.93□□□□□ -1.3
COL17A1-207ENST00000488320 KIR2DS2P43631 304 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 APOC4P55056 127 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 RBM11P57052 281 aaKnown RBP6.93□□□□□ -1.3
COL17A1-207ENST00000488320 MS4A2Q01362 244 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 ZNF45Q02386 682 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 ZNF85Q03923 595 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 TRIM25Q14258 630 aaKnown RBP6.93□□□□□ -1.3
COL17A1-207ENST00000488320 GNMTQ14749 295 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 PSG5Q15238 335 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 MPV17LQ2QL34 196 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 DEFB135Q30KP9 77 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 GLDNQ6ZMI3 551 aaPredicted RBP6.93□□□□□ -1.3
COL17A1-207ENST00000488320 KCTD20Q7Z5Y7 419 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 LINC00596Q86U02 117 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 OR2AK2Q8NG84 335 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 DNAJC9Q8WXX5 260 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 USMG5Q96IX5 58 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 COA4Q9NYJ1 87 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 TECRQ9NZ01 308 aaKnown RBP6.93□□□□□ -1.3
COL17A1-207ENST00000488320 RCC2Q9P258 522 aaKnown RBP6.93□□□□□ -1.3
COL17A1-207ENST00000488320 FBXL17Q9UF56 701 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 TAGLN3Q9UI15 199 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 SELENOKQ9Y6D0 94 aa6.93□□□□□ -1.3
COL17A1-207ENST00000488320 DNAH11Q96DT5 4516 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 SAA2-SAA4A0A096LPE2 208 aa6.92□□□□□ -1.3
COL17A1-207ENST00000488320 A0A1B0GVY2 172 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms