RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 TCEAL6Q6IPX3 200 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 BTNL3Q6UXE8 466 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 MRPL21Q7Z2W9 205 aaKnown RBP10.55□□□□□ -0.72
HSPG2-211ENST00000486901 RPS19BP1Q86WX3 136 aaKnown RBP10.55□□□□□ -0.72
HSPG2-211ENST00000486901 OR10J5Q8NHC4 309 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 IL22RA2Q969J5 263 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 ADGRG7Q96K78 797 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 C11orf1Q9H5F2 150 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 RNF115Q9Y4L5 304 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 DMXL2Q8TDJ6 3036 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 RPL36A-HNRNPH2H7BZ11 118 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 MDH2P40926 338 aaKnown RBP10.55□□□□□ -0.72
HSPG2-211ENST00000486901 SLC25A53Q5H9E4 307 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 PRR31Q5SQ13 230 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 FAM185AQ8N0U4 392 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 TMEM256Q8N2U0 113 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 RPP25LQ8N5L8 163 aaKnown RBP10.55□□□□□ -0.72
HSPG2-211ENST00000486901 TPRX1Q8N7U7 411 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 OR13D1Q8NGV5 346 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 DERL1Q9BUN8 251 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 UCK1Q9HA47 277 aa10.55□□□□□ -0.72
HSPG2-211ENST00000486901 ATMQ13315 3056 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 PAGE4O60829 102 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 IGKV1-39P01597 117 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 IGKV1D-39P04432 117 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 OR1P1Q8NH06 330 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 SYNGR2O43760 224 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 HBE1P02100 147 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 CELA3AP09093 270 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 CA6P23280 308 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 CLDN15P56746 228 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 ARF1P84077 181 aaKnown RBP10.54□□□□□ -0.72
HSPG2-211ENST00000486901 BSXQ3C1V8 233 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 FAM78BQ5VT40 261 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 FADS6Q8N9I5 356 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 M1APQ8TC57 530 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 ZDHHC16Q969W1 377 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 TMEM56Q96MV1 263 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 IL17BQ9UHF5 180 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 TMEM56-RWDD3S4R434 201 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 NUPR1O60356 82 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 GDF1P27539 372 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 CD81P60033 236 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 ASPHD1Q5U4P2 390 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 TMEM211Q6ICI0 200 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 ZNF705AQ6ZN79 300 aaPredicted RBP10.54□□□□□ -0.72
HSPG2-211ENST00000486901 DDA1Q9BW61 102 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 HES7Q9BYE0 225 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 C12orf49Q9H741 205 aa10.54□□□□□ -0.72
HSPG2-211ENST00000486901 SPG11Q96JI7 2443 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 DEFB108AA8MXU0 73 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 G6PCP35575 357 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 SSR4P51571 173 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 TAS2R60P59551 318 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 BAXQ07812 192 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 PCOLCEQ15113 449 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 SPINK14Q6IE38 97 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 RABEPKQ7Z6M1 372 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 OR5B12Q96R08 314 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 PHF7Q9BWX1 381 aaPredicted RBP10.53□□□□□ -0.72
HSPG2-211ENST00000486901 PARLQ9H300 379 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 COL4A2P08572 1712 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 A0A087WWC5 75 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 CLEC18AA5D8T8 446 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 RAMP3O60896 148 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 IGKV1-5P01602 117 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 FOSL1P15407 271 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 THBS3P49746 956 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 TFF3Q07654 80 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 TDRG1Q3Y452 100 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 ACSM6Q6P461 480 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 TEX38Q6PEX7 206 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 MKXQ8IYA7 352 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 KDF1Q8NAX2 398 aaPredicted RBP10.53□□□□□ -0.72
HSPG2-211ENST00000486901 CLEC18CQ8NCF0 446 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 MRPL30Q8TCC3 161 aaKnown RBP10.53□□□□□ -0.72
HSPG2-211ENST00000486901 CLDN23Q96B33 292 aa10.53□□□□□ -0.72
HSPG2-211ENST00000486901 IGHV3-43A0A0B4J1X8 118 aa10.52□□□□□ -0.72
HSPG2-211ENST00000486901 FAM166BA8MTA8 275 aa10.52□□□□□ -0.72
HSPG2-211ENST00000486901 IL18BPO95998 194 aa10.52□□□□□ -0.72
HSPG2-211ENST00000486901 IGHV3-43DP0DP04 118 aa10.52□□□□□ -0.72
HSPG2-211ENST00000486901 UCP1P25874 307 aa10.52□□□□□ -0.72
HSPG2-211ENST00000486901 IL24Q13007 206 aa10.52□□□□□ -0.72
HSPG2-211ENST00000486901 TMEM241Q24JQ0 296 aa10.52□□□□□ -0.72
HSPG2-211ENST00000486901 ZNF525Q8N782 197 aa10.52□□□□□ -0.72
HSPG2-211ENST00000486901 RFESDQ8TAC1 157 aa10.52□□□□□ -0.72
HSPG2-211ENST00000486901 IMMP2LQ96T52 175 aa10.52□□□□□ -0.72
HSPG2-211ENST00000486901 SIRT7Q9NRC8 400 aa10.52□□□□□ -0.72
HSPG2-211ENST00000486901 PITPNC1Q9UKF7 332 aa10.52□□□□□ -0.72
HSPG2-211ENST00000486901 TRAPPC2LQ9UL33 140 aa10.52□□□□□ -0.72
HSPG2-211ENST00000486901 CA11O75493 328 aa10.52□□□□□ -0.73
HSPG2-211ENST00000486901 IGLV3-19P01714 112 aa10.52□□□□□ -0.73
HSPG2-211ENST00000486901 DSCR4P56555 118 aaPredicted RBP10.52□□□□□ -0.73
HSPG2-211ENST00000486901 RPL23P62829 140 aaKnown RBP10.52□□□□□ -0.73
HSPG2-211ENST00000486901 MAFAQ8NHW3 353 aaPredicted RBP10.52□□□□□ -0.73
HSPG2-211ENST00000486901 C19orf25Q9UFG5 118 aaPredicted RBP10.52□□□□□ -0.73
HSPG2-211ENST00000486901 MED13Q9UHV7 2174 aa10.52□□□□□ -0.73
HSPG2-211ENST00000486901 PINLYPA6NC86 204 aa10.52□□□□□ -0.73
HSPG2-211ENST00000486901 MAS1LP35410 378 aa10.52□□□□□ -0.73
HSPG2-211ENST00000486901 SLC38A11Q08AI6 406 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms