RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CD34P28906 385 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 HSPA9P38646 679 aaKnown RBP3.08□□□□□ -1.92
PTCD3-214ENST00000483925 MNAT1P51948 309 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 IAH1Q2TAA2 248 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-214ENST00000483925 RNASE13Q5GAN3 156 aaKnown RBP3.08□□□□□ -1.92
PTCD3-214ENST00000483925 LPCAT3Q6P1A2 487 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 ALKAL1Q6UXT8 129 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 ZNF567Q8N184 647 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 Q8N9W7 124 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 TMEM75Q8N9X5 138 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 OR11H1Q8NG94 326 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 OR51A2Q8NGJ7 313 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 OR2K2Q8NGT1 345 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 OR11H2Q8NH07 326 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 IMMP1LQ96LU5 166 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 DERL3Q96Q80 235 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 OR52B2Q96RD2 323 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 CDX2Q99626 313 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-214ENST00000483925 MRPL27Q9P0M9 148 aaKnown RBP3.08□□□□□ -1.92
PTCD3-214ENST00000483925 NYAP2Q9P242 653 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 ENOPH1Q9UHY7 261 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 VWA8A3KMH1 1905 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 GRIN2BQ13224 1484 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 SYNMO15061 1565 aa3.08□□□□□ -1.92
PTCD3-214ENST00000483925 TMEM131Q92545 1883 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 IGHV1-45A0A0A0MS14 117 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 IGHV3-49A0A0A0MS15 119 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 C5orf63A6NC05 138 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 FAAHO00519 579 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 S1PR2O95136 353 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 IGHG2P01859 326 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 CRHP06850 196 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 OR56A5P0C7T3 313 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 SEC11BP0C7V7 166 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 CYBAP13498 195 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 ORM2P19652 201 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 ESRRGP62508 458 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 C1orf194Q5T5A4 169 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 MRPL2Q5T653 305 aaKnown RBP3.07□□□□□ -1.92
PTCD3-214ENST00000483925 SBSNQ6UWP8 590 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 TCF23Q7RTU1 214 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 DPPA2Q7Z7J5 298 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 C15orf56Q8N910 161 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 C12orf29Q8N999 325 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 LY6G5BQ8NDX9 201 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 LHFPL5Q8TAF8 219 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 PDXPQ96GD0 296 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 SLC25A44Q96H78 314 aaPredicted RBP3.07□□□□□ -1.92
PTCD3-214ENST00000483925 MED28Q9H204 178 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 C11orf49Q9H6J7 331 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 C12orf10Q9HB07 376 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 ZNRD1Q9P1U0 126 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 RSL24D1Q9UHA3 163 aaKnown RBP3.07□□□□□ -1.92
PTCD3-214ENST00000483925 PYCARDQ9ULZ3 195 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 NDUFAF1Q9Y375 327 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 UFC1Q9Y3C8 167 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 CSAG2Q9Y5P2 127 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 MTUS2Q5JR59 1369 aa3.07□□□□□ -1.92
PTCD3-214ENST00000483925 EXOC1LA0A1B0GW35 172 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 BCL2L11O43521 198 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 CDRT1O95170 752 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 CXorf1O96002 111 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 NBEAP1P0C6P0 100 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 ESDP10768 282 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 CNTFRP26992 372 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 ALDH3A1P30838 453 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 OR10J1P30954 320 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 MPIP34949 423 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 LHX2P50458 406 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 HERVK_113P63121 156 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 LOXL1Q08397 574 aaPredicted RBP3.06□□□□□ -1.92
PTCD3-214ENST00000483925 TMEM241Q24JQ0 296 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 SLC35F6Q8N357 371 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 STX19Q8N4C7 294 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 OR10G2Q8NGC3 310 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 OR52L1Q8NGH7 329 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 OR5W2Q8NH69 310 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 MS4A6EQ96DS6 147 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 REEP6Q96HR9 211 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 NARS2Q96I59 477 aaKnown RBP3.06□□□□□ -1.92
PTCD3-214ENST00000483925 ABHD14BQ96IU4 210 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 PPP1R2P1Q96PQ5 205 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 TRIB3Q96RU7 358 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 TBL1YQ9BQ87 522 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 GINS3Q9BRX5 216 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 MARVELD1Q9BSK0 173 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 MIXL1Q9H2W2 232 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 SND1-IT1Q9HBX3 110 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 TAS2R1Q9NYW7 299 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 DNAJC12Q9UKB3 198 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 PKIGQ9Y2B9 76 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 TMEM14AQ9Y6G1 99 aa3.06□□□□□ -1.92
PTCD3-214ENST00000483925 GPATCH8Q9UKJ3 1502 aaKnown RBP3.05□□□□□ -1.92
PTCD3-214ENST00000483925 DCCP43146 1447 aa3.05□□□□□ -1.92
PTCD3-214ENST00000483925 WRNQ14191 1432 aaPredicted RBP eCLIP3.05□□□□□ -1.92
PTCD3-214ENST00000483925 KIF24Q5T7B8 1368 aa3.05□□□□□ -1.92
PTCD3-214ENST00000483925 IGKV3D-15A0A087WSY6 115 aa3.05□□□□□ -1.92
PTCD3-214ENST00000483925 IGKV1-6A0A0C4DH72 117 aa3.05□□□□□ -1.92
PTCD3-214ENST00000483925 A0A1B0GVY2 172 aa3.05□□□□□ -1.92
PTCD3-214ENST00000483925 TMEM223A0PJW6 202 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms