RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 CD37P11049 281 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 GALP22466 123 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 ZBTB25P24278 435 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 SERPINB10P48595 397 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 LSAMPQ13449 338 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 DIAPH2-AS1Q14236 149 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 IRF3Q14653 427 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 MMDQ15546 238 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 HMGN3Q15651 99 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 RAB11BQ15907 218 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 OXLD1Q5BKU9 147 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 CT45A1Q5HYN5 189 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 TCTEX1D4Q5JR98 221 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 SIGIRRQ6IA17 410 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 ZNF833PQ6ZTB9 187 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 ZNF367Q7RTV3 350 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 LRRTM1Q86UE6 522 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 SVOPQ8N4V2 548 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 TCTEX1D1Q8N7M0 179 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 RNF152Q8N8N0 203 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 Q8N9W7 124 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 KLHL30-AS1Q8NEE0 82 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 OR10V1Q8NGI7 309 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 OR1L1Q8NH94 360 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 CT45A3Q8NHU0 189 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 ZNF251Q9BRH9 671 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 Q9H521 79 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 ZNF581Q9P0T4 197 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 WNK1Q9H4A3 2382 aa9.05□□□□□ -0.96
CCM2-213ENST00000480658 NAPSAO96009 420 aa9.04□□□□□ -0.96
CCM2-213ENST00000480658 HLA-DRB1P01911 266 aa9.04□□□□□ -0.96
CCM2-213ENST00000480658 CRHBPP24387 322 aa9.04□□□□□ -0.96
CCM2-213ENST00000480658 GADD45AP24522 165 aa9.04□□□□□ -0.96
CCM2-213ENST00000480658 MYL9P24844 172 aa9.04□□□□□ -0.96
CCM2-213ENST00000480658 BLVRBP30043 206 aaPredicted RBP9.04□□□□□ -0.96
CCM2-213ENST00000480658 CDX1P47902 265 aaPredicted RBP9.04□□□□□ -0.96
CCM2-213ENST00000480658 THBS3P49746 956 aa9.04□□□□□ -0.96
CCM2-213ENST00000480658 P2RY14Q15391 338 aa9.04□□□□□ -0.96
CCM2-213ENST00000480658 UTF1Q5T230 341 aa9.04□□□□□ -0.96
CCM2-213ENST00000480658 TMEM65Q6PI78 240 aa9.04□□□□□ -0.96
CCM2-213ENST00000480658 LINC00482Q8N8I6 264 aa9.04□□□□□ -0.96
CCM2-213ENST00000480658 IL1F10Q8WWZ1 152 aa9.04□□□□□ -0.96
CCM2-213ENST00000480658 MGLLQ99685 303 aa9.04□□□□□ -0.96
CCM2-213ENST00000480658 RNF5Q99942 180 aa9.04□□□□□ -0.96
CCM2-213ENST00000480658 SLC23A1Q9UHI7 598 aa9.04□□□□□ -0.96
CCM2-213ENST00000480658 ZNF107Q9UII5 783 aaPredicted RBP9.04□□□□□ -0.96
CCM2-213ENST00000480658 RAB26Q9ULW5 256 aa9.04□□□□□ -0.96
CCM2-213ENST00000480658 SAA2-SAA4A0A096LPE2 208 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 IGHV3-72A0A0B4J1Y9 119 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 NBR2O15453 112 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 HSPA12AO43301 675 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 RAMP3O60896 148 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 IGHG4P01861 327 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 SAA2P0DJI9 122 aaPredicted RBP9.03□□□□□ -0.96
CCM2-213ENST00000480658 IGLL1P15814 213 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 CALRP27797 417 aaKnown RBP9.03□□□□□ -0.96
CCM2-213ENST00000480658 CD40LGP29965 261 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 ZNF134P52741 427 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 GABARAPL2P60520 117 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 QRFPP83859 136 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 UNC119Q13432 240 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 KIR2DS1Q14954 304 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 FOXB2Q5VYV0 432 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 PYHIN1Q6K0P9 492 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 ZNF880Q6PDB4 577 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 C6orf201Q7Z4U5 140 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 ZNF329Q86UD4 541 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 FAM89BQ8N5H3 189 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 OR5M8Q8NGP6 311 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 SETD6Q8TBK2 473 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 C4orf3Q8WVX3 66 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 NOL4LQ96MY1 436 aaPredicted RBP9.03□□□□□ -0.96
CCM2-213ENST00000480658 SULT4A1Q9BR01 284 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 RNF150Q9ULK6 438 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 V9GY05 133 aa9.03□□□□□ -0.96
CCM2-213ENST00000480658 METTL21EPA6NDL7 271 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 SH2D7A6NKC9 451 aaPredicted RBP9.02□□□□□ -0.97
CCM2-213ENST00000480658 SLC31A2O15432 143 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 SCGNO76038 276 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 PPP1CCP36873 323 aaKnown RBP9.02□□□□□ -0.97
CCM2-213ENST00000480658 ACTBP60709 375 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 HLA-DRB3P79483 266 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 TAGLNQ01995 201 aaKnown RBP9.02□□□□□ -0.97
CCM2-213ENST00000480658 EGFEM1PQ0D2K5 195 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 CBX3Q13185 183 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 FAM27D1Q5T7N8 215 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 IZUMO2Q6UXV1 221 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 Q6ZPA2 131 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 MRPL41Q8IXM3 137 aaKnown RBP9.02□□□□□ -0.97
CCM2-213ENST00000480658 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.02□□□□□ -0.97
CCM2-213ENST00000480658 UBALD1Q8TB05 177 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 FCGR1BQ92637 280 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 TMEM203Q969S6 136 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 FAAP24Q9BTP7 215 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 LPAR5Q9H1C0 372 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 PLSCR3Q9NRY6 295 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 AURKAIP1Q9NWT8 199 aaPredicted RBP9.02□□□□□ -0.97
CCM2-213ENST00000480658 NKX1-2Q9UD57 310 aaPredicted RBP9.02□□□□□ -0.97
CCM2-213ENST00000480658 KIAA2026Q5HYC2 2103 aa9.02□□□□□ -0.97
CCM2-213ENST00000480658 PLXNB1O43157 2135 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms