RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	PRB3	Q04118	309 aa	Predicted RBP	12.49	□□□□□ -0.41
HDLBP-238	ENST00000479894	HACD4	Q5VWC8	232 aa		12.49	□□□□□ -0.41
HDLBP-238	ENST00000479894	MUC7	Q8TAX7	377 aa		12.49	□□□□□ -0.41
HDLBP-238	ENST00000479894	SLC25A38	Q96DW6	304 aa		12.49	□□□□□ -0.41
HDLBP-238	ENST00000479894	COQ2	Q96H96	371 aa		12.49	□□□□□ -0.41
HDLBP-238	ENST00000479894	C6orf62	Q9GZU0	229 aa	Predicted RBP	12.49	□□□□□ -0.41
HDLBP-238	ENST00000479894		A0A0A6YYD4	124 aa		12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	KBTBD11-OT1	A0A1B0GTJ5	212 aa		12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	MFNG	O00587	321 aa		12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	PEX14	O75381	377 aa		12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	CDK2	P24941	298 aa		12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	GLP1R	P43220	463 aa		12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	DLX1	P56177	255 aa		12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	KIR2DS1	Q14954	304 aa		12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	SRSF7	Q16629	238 aa	Known RBP eCLIP	12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	FGFRL1	Q8N441	504 aa		12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	PLPPR1	Q8TBJ4	325 aa		12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	AJUBA	Q96IF1	538 aa		12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	DCUN1D5	Q9BTE7	237 aa		12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	SLIRP	Q9GZT3	109 aa	Known RBP	12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	NXF2	Q9GZY0	626 aa	Known RBP	12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	ING3	Q9NXR8	418 aa		12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	AK3	Q9UIJ7	227 aa		12.48	□□□□□ -0.41
HDLBP-238	ENST00000479894	C17orf98	A8MV24	154 aa		12.47	□□□□□ -0.41
HDLBP-238	ENST00000479894	HPGDS	O60760	199 aa		12.47	□□□□□ -0.41
HDLBP-238	ENST00000479894	NAPSA	O96009	420 aa		12.47	□□□□□ -0.41
HDLBP-238	ENST00000479894	GNB3	P16520	340 aa		12.47	□□□□□ -0.41
HDLBP-238	ENST00000479894	DTYMK	P23919	212 aa		12.47	□□□□□ -0.41
HDLBP-238	ENST00000479894	HOXD3	P31249	432 aa	Predicted RBP	12.47	□□□□□ -0.41
HDLBP-238	ENST00000479894	MRPS10	P82664	201 aa	Known RBP	12.47	□□□□□ -0.41
HDLBP-238	ENST00000479894	HABP2	Q14520	560 aa	Predicted RBP	12.47	□□□□□ -0.41
HDLBP-238	ENST00000479894	PLAC9	Q5JTB6	97 aa		12.47	□□□□□ -0.41
HDLBP-238	ENST00000479894	HEPN1	Q6WQI6	88 aa		12.47	□□□□□ -0.41
HDLBP-238	ENST00000479894	OR13D1	Q8NGV5	346 aa		12.47	□□□□□ -0.41
HDLBP-238	ENST00000479894	C17orf50	Q8WW18	174 aa		12.47	□□□□□ -0.41
HDLBP-238	ENST00000479894	LINC00574	Q9H8X3	128 aa		12.47	□□□□□ -0.41
HDLBP-238	ENST00000479894	MBNL3	Q9NUK0	354 aa	Known RBP	12.47	□□□□□ -0.41
HDLBP-238	ENST00000479894	ZMAT5	Q9UDW3	170 aa	Known RBP	12.47	□□□□□ -0.41
HDLBP-238	ENST00000479894	RGS11	O94810	467 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	DIRAS3	O95661	229 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	ELK1	P19419	428 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	PRSS3	P35030	304 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	PLA2G7	Q13093	441 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	MOGAT2	Q3SYC2	334 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	ZNF260	Q3ZCT1	412 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	STEAP3	Q658P3	488 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	RTN4RL2	Q86UN3	420 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	TPRX1	Q8N7U7	411 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	OR52M1	Q8NGK5	317 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	PIFO	Q8TCI5	191 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	ARL11	Q969Q4	196 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	CREB3L1	Q96BA8	519 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	GALM	Q96C23	342 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	DIRAS2	Q96HU8	199 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	PRSS22	Q9GZN4	317 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	AUNIP	Q9H7T9	357 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	SCPEP1	Q9HB40	452 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	CALY	Q9NYX4	217 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	EXTL2	Q9UBQ6	330 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894	SESN1	Q9Y6P5	492 aa		12.46	□□□□□ -0.41
HDLBP-238	ENST00000479894		A0A1W2PRX2	142 aa		12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894	SULT1C2	O00338	296 aa		12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894	EIF4E	P06730	217 aa	Known RBP	12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894	CTXN2	P0C2S0	81 aa		12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894	PTBP1	P26599	531 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894	TAS2R20	P59543	309 aa		12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894	ZNF273	Q14593	569 aa		12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894		Q3ZCU0	254 aa		12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894	HCP5	Q6MZN7	132 aa		12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894		Q6ZS49	121 aa		12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894	LINC00299	Q6ZSB3	139 aa		12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894	OR4K15	Q8NH41	348 aa		12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894	SETD6	Q8TBK2	473 aa		12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894	MRPL30	Q8TCC3	161 aa	Known RBP	12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894	MRGPRD	Q8TDS7	321 aa		12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894	CCDC107	Q8WV48	283 aa		12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894	ZNF581	Q9P0T4	197 aa		12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894	MRPS7	Q9Y2R9	242 aa	Known RBP	12.45	□□□□□ -0.42
HDLBP-238	ENST00000479894	NPIPB11	E5RHQ5	1161 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	CTDSP2	O14595	271 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	CGB3	P0DN86	165 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	CGB7	P0DN87	165 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	IGHV1-8	P0DP01	117 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	PRRX1	P54821	245 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	DLX6	P56179	175 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	SPANXN2	Q5MJ10	180 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	PYHIN1	Q6K0P9	492 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	ZNF880	Q6PDB4	577 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	OR13A1	Q8NGR1	328 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	TAF9B	Q9HBM6	251 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	ZNF286A	Q9HBT8	521 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894		Q9N2K0	584 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	IDI2-AS1	Q9NZ38	188 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	KCNK7	Q9Y2U2	307 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	TSSC4	Q9Y5U2	329 aa	Predicted RBP	12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	DSCAML1	Q8TD84	2053 aa		12.44	□□□□□ -0.42
HDLBP-238	ENST00000479894	TMEM235	A6NFC5	223 aa		12.43	□□□□□ -0.42
HDLBP-238	ENST00000479894	VGLL3	A8MV65	326 aa		12.43	□□□□□ -0.42
HDLBP-238	ENST00000479894	TRDC	B7Z8K6	153 aa		12.43	□□□□□ -0.42
HDLBP-238	ENST00000479894	TOR1A	O14656	332 aa		12.43	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms