RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 CREB3L1Q96BA8 519 aa10.68□□□□□ -0.7
CHD3-210ENST00000479080 MOB3AQ96BX8 217 aa10.68□□□□□ -0.7
CHD3-210ENST00000479080 YPEL2Q96QA6 119 aa10.68□□□□□ -0.7
CHD3-210ENST00000479080 AGMATQ9BSE5 352 aa10.68□□□□□ -0.7
CHD3-210ENST00000479080 TMEM133Q9H2Q1 129 aa10.68□□□□□ -0.7
CHD3-210ENST00000479080 ZNF69Q9UC07 566 aa10.68□□□□□ -0.7
CHD3-210ENST00000479080 PSG11Q9UQ72 335 aa10.68□□□□□ -0.7
CHD3-210ENST00000479080 CELSR1Q9NYQ6 3014 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 IGHV2-26A0A0B4J1V2 119 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 TRAV20A0A0B4J274 112 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 ODF3BA8MYP8 253 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 IGLV1-47P01700 117 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 ZBTB25P24278 435 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 COX7A1P24310 79 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 SLC6A1P30531 599 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 INPP1P49441 399 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 GZMKP49863 264 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 TMEM30BQ3MIR4 351 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 KLF17Q5JT82 389 aaPredicted RBP10.67□□□□□ -0.7
CHD3-210ENST00000479080 SLC25A48Q6ZT89 311 aaKnown RBP10.67□□□□□ -0.7
CHD3-210ENST00000479080 NRARPQ7Z6K4 114 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 OR10J5Q8NHC4 309 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 AJUBAQ96IF1 538 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 GINS4Q9BRT9 223 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 MCUBQ9NWR8 336 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 GNG12Q9UBI6 72 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 VSIG4Q9Y279 399 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 OR2W1Q9Y3N9 320 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 CREBBPQ92793 2442 aa10.67□□□□□ -0.7
CHD3-210ENST00000479080 DOCK11Q5JSL3 2073 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 NAP1L6A6NFF2 107 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 DISC1C4P0D8 188 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 ITGB1BP1O14713 200 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 TOX4O94842 621 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 TGFAP01135 160 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 FSHBP01225 129 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 FXYD4P59646 89 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 BAMBIQ13145 260 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 EIF4EBP1Q13541 118 aaPredicted RBP10.66□□□□□ -0.7
CHD3-210ENST00000479080 DIAPH2-AS1Q14236 149 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 SCGB2B2Q4G0G5 96 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 DCAF12L2Q5VW00 463 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 BTNL3Q6UXE8 466 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 IDO2Q6ZQW0 420 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 LINC00311Q8N616 119 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 OR4P4Q8NGL7 312 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 MARCH1Q8TCQ1 289 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 UPRTQ96BW1 309 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 RBMXL1Q96E39 390 aaKnown RBP10.66□□□□□ -0.7
CHD3-210ENST00000479080 ZNF251Q9BRH9 671 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 PCGF1Q9BSM1 259 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 METTL8Q9H825 291 aaKnown RBP10.66□□□□□ -0.7
CHD3-210ENST00000479080 FLVCR2Q9UPI3 526 aa10.66□□□□□ -0.7
CHD3-210ENST00000479080 FLNAP21333 2647 aaKnown RBP10.66□□□□□ -0.7
CHD3-210ENST00000479080 A0A1W2PPH5 198 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 J3QR06 171 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 HSPA12AO43301 675 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 NDUFB6O95139 128 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 OR8U9P0C7N5 309 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 IGHV4-38-2P0DP08 117 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 PI3P19957 117 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 FAUP35544 74 aaKnown RBP10.65□□□□□ -0.7
CHD3-210ENST00000479080 TSPAN5P62079 268 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 Q3ZCU0 254 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 SPNS3Q6ZMD2 512 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 TMEM17Q86X19 198 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 PDZD9Q8IXQ8 264 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 ABHD12Q8N2K0 398 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 C8orf31Q8N9H6 132 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 OR11H6Q8NGC7 330 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 OR6F1Q8NGZ6 308 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 OR8U1Q8NH10 309 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 TERB2Q8NHR7 220 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 TOMM40LQ969M1 308 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 TMEM230Q96A57 120 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 ABHD14BQ96IU4 210 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 GPHA2Q96T91 129 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 PRRT1Q99946 306 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 SMR3AQ99954 134 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 ABHD14AQ9BUJ0 271 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 CCL28Q9NRJ3 127 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 ZNF221Q9UK13 617 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 RNF150Q9ULK6 438 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 GPR132Q9UNW8 380 aa10.65□□□□□ -0.7
CHD3-210ENST00000479080 SOX21Q9Y651 276 aaPredicted RBP10.65□□□□□ -0.7
CHD3-210ENST00000479080 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.65□□□□□ -0.7
CHD3-210ENST00000479080 IGHV3OR16-10A0A075B7F0 116 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 CENPVL3A0A0U1RRI6 287 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 A0A1W2PRD5 423 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 A0A1W2PRF3 423 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 A0A1W2PRM7 423 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 IFNA6P05013 189 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 GNRHRP30968 328 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 UCP3P55916 312 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 LINC00205P59089 165 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 OXA1LQ15070 435 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 HLA-DRB5Q30154 266 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 RUSC1-AS1Q66K80 236 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 ZNF626Q68DY1 528 aa10.64□□□□□ -0.71
CHD3-210ENST00000479080 CYB5R2Q6BCY4 276 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms