RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 OR10K2Q6IF99 312 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 LCNL1Q6ZST4 164 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 GALMQ96C23 342 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 DUX3Q96PT4 197 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 NEDD4LQ96PU5 975 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 CHCHD6Q9BRQ6 235 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 FAAP24Q9BTP7 215 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 ABHD14AQ9BUJ0 271 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 TM2D1Q9BX74 207 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 VCXQ9H320 206 aa11.98□□□□□ -0.49
VTI1A-203ENST00000472892 RGS11O94810 467 aa11.97□□□□□ -0.49
VTI1A-203ENST00000472892 VDAC1P21796 283 aa11.97□□□□□ -0.49
VTI1A-203ENST00000472892 HTR2CP28335 458 aa11.97□□□□□ -0.49
VTI1A-203ENST00000472892 HMGN3Q15651 99 aa11.97□□□□□ -0.49
VTI1A-203ENST00000472892 ZNF833PQ6ZTB9 187 aa11.97□□□□□ -0.49
VTI1A-203ENST00000472892 CEACAM19Q7Z692 300 aa11.97□□□□□ -0.49
VTI1A-203ENST00000472892 OR8U1Q8NH10 309 aa11.97□□□□□ -0.49
VTI1A-203ENST00000472892 KCNG3Q8TAE7 436 aa11.97□□□□□ -0.49
VTI1A-203ENST00000472892 RITA1Q96K30 269 aa11.97□□□□□ -0.49
VTI1A-203ENST00000472892 NABP2Q9BQ15 211 aa11.97□□□□□ -0.49
VTI1A-203ENST00000472892 TMED9Q9BVK6 235 aa11.97□□□□□ -0.49
VTI1A-203ENST00000472892 SLC22A1O15245 554 aa11.96□□□□□ -0.49
VTI1A-203ENST00000472892 UCHL1P09936 223 aa11.96□□□□□ -0.49
VTI1A-203ENST00000472892 PSMB8P28062 276 aa11.96□□□□□ -0.49
VTI1A-203ENST00000472892 ACTBP60709 375 aa11.96□□□□□ -0.49
VTI1A-203ENST00000472892 QRFPP83859 136 aa11.96□□□□□ -0.49
VTI1A-203ENST00000472892 UNC119Q13432 240 aa11.96□□□□□ -0.49
VTI1A-203ENST00000472892 IRF3Q14653 427 aa11.96□□□□□ -0.49
VTI1A-203ENST00000472892 HSD17B12Q53GQ0 312 aa11.96□□□□□ -0.49
VTI1A-203ENST00000472892 RBM48Q5RL73 367 aaKnown RBP11.96□□□□□ -0.49
VTI1A-203ENST00000472892 C6orf201Q7Z4U5 140 aa11.96□□□□□ -0.49
VTI1A-203ENST00000472892 KCTD7Q96MP8 289 aa11.96□□□□□ -0.49
VTI1A-203ENST00000472892 TMEM59Q9BXS4 323 aa11.96□□□□□ -0.49
VTI1A-203ENST00000472892 MRPL20Q9BYC9 149 aaKnown RBP11.96□□□□□ -0.49
VTI1A-203ENST00000472892 SCN3BQ9NY72 215 aa11.96□□□□□ -0.49
VTI1A-203ENST00000472892 ZMAT5Q9UDW3 170 aaKnown RBP11.96□□□□□ -0.49
VTI1A-203ENST00000472892 ZNF107Q9UII5 783 aaPredicted RBP11.96□□□□□ -0.49
VTI1A-203ENST00000472892 TMEM14DPA8MWL7 114 aa11.95□□□□□ -0.5
VTI1A-203ENST00000472892 NAPSAO96009 420 aa11.95□□□□□ -0.5
VTI1A-203ENST00000472892 OR5H8P0DN80 308 aa11.95□□□□□ -0.5
VTI1A-203ENST00000472892 SLC2A2P11168 524 aaPredicted RBP11.95□□□□□ -0.5
VTI1A-203ENST00000472892 PPIFP30405 207 aaKnown RBP11.95□□□□□ -0.5
VTI1A-203ENST00000472892 OR3A3P47888 321 aa11.95□□□□□ -0.5
VTI1A-203ENST00000472892 MED22Q15528 200 aa11.95□□□□□ -0.5
VTI1A-203ENST00000472892 MMDQ15546 238 aa11.95□□□□□ -0.5
VTI1A-203ENST00000472892 DEFB136Q30KP8 78 aa11.95□□□□□ -0.5
VTI1A-203ENST00000472892 VAX1Q5SQQ9 334 aa11.95□□□□□ -0.5
VTI1A-203ENST00000472892 ZNF880Q6PDB4 577 aa11.95□□□□□ -0.5
VTI1A-203ENST00000472892 NPBQ8NG41 125 aa11.95□□□□□ -0.5
VTI1A-203ENST00000472892 MYOZ3Q8TDC0 251 aa11.95□□□□□ -0.5
VTI1A-203ENST00000472892 NICN1Q9BSH3 213 aa11.95□□□□□ -0.5
VTI1A-203ENST00000472892 ABRACLQ9P1F3 81 aa11.95□□□□□ -0.5
VTI1A-203ENST00000472892 NKX1-2Q9UD57 310 aaPredicted RBP11.95□□□□□ -0.5
VTI1A-203ENST00000472892 SAA2-SAA4A0A096LPE2 208 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 BPNT1O95861 308 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 HLA-DRB1P01911 266 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 SAA2P0DJI9 122 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-203ENST00000472892 MYF6P23409 242 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 CNTFRP26992 372 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 BLVRBP30043 206 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-203ENST00000472892 DGCR2P98153 550 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 TPBGQ13641 420 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 KIAA0141Q14154 515 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-203ENST00000472892 FAM71F2Q6NXP2 309 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 SVOPQ8N4V2 548 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 OR2AK2Q8NG84 335 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 OR6M1Q8NGM8 313 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 C4orf3Q8WVX3 66 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 ZNF251Q9BRH9 671 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 IFI27L2Q9H2X8 130 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 OR51J1Q9H342 316 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 RIMS4Q9H426 269 aaPredicted RBP11.94□□□□□ -0.5
VTI1A-203ENST00000472892 KCNK15Q9H427 330 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 DUSP21Q9H596 190 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 STEAP1Q9UHE8 339 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 DNAH9Q9NYC9 4486 aa11.94□□□□□ -0.5
VTI1A-203ENST00000472892 COL7A1Q02388 2944 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 A0A0A6YYD4 124 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 TRBV6-6A0A0A6YYG2 114 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 IGHV7-81A0A0B4J1V7 117 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 ANKRD65E5RJM6 399 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 NBR2O15453 112 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 RAMP3O60896 148 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 RAB25P57735 213 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 FHL3Q13643 280 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 LIPKQ5VXJ0 399 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 LIN54Q6MZP7 749 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 TMEM91Q6ZNR0 172 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 FAM89BQ8N5H3 189 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 OR5M8Q8NGP6 311 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 IL1F10Q8WWZ1 152 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 UFD1Q92890 307 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 TMEM203Q969S6 136 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 ANKRD60Q9BZ19 345 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 LPAR5Q9H1C0 372 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 KLK15Q9H2R5 256 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 PLEKHJ1Q9NW61 149 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 PIPOXQ9P0Z9 390 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 SLC23A1Q9UHI7 598 aa11.93□□□□□ -0.5
VTI1A-203ENST00000472892 G3V318 75 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms