RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 SETD2Q9BYW2 2564 aaPredicted RBP5.39□□□□□ -1.55
SPEN-204ENST00000471538 TRAV39A0A0B4J263 110 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.39□□□□□ -1.55
SPEN-204ENST00000471538 IGSF23A1L1A6 192 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 FAM157AC9JC47 383 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 K7EM74 188 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 DNASE2O00115 360 aaPredicted RBP5.39□□□□□ -1.55
SPEN-204ENST00000471538 SH2D1BO14796 132 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 WNT9BO14905 357 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 TNFSF12O43508 249 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 MED6O75586 246 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 ATG12O94817 140 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 TMEM50AO95807 157 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 IGKV1-39P01597 117 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 IGKV1D-39P04432 117 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 GRPP07492 148 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 NKX2-1P43699 371 aaPredicted RBP5.39□□□□□ -1.55
SPEN-204ENST00000471538 CEBPDP49716 269 aaPredicted RBP5.39□□□□□ -1.55
SPEN-204ENST00000471538 CAV2P51636 162 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 POLR2GP62487 172 aaKnown RBP eCLIP5.39□□□□□ -1.55
SPEN-204ENST00000471538 HOXA4Q00056 320 aaPredicted RBP5.39□□□□□ -1.55
SPEN-204ENST00000471538 PAX5Q02548 391 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 NHLH2Q02577 135 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 BTN1A1Q13410 526 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 EIF4EBP1Q13541 118 aaPredicted RBP5.39□□□□□ -1.55
SPEN-204ENST00000471538 C3orf36Q3SXR2 165 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 CXorf66Q5JRM2 361 aaPredicted RBP5.39□□□□□ -1.55
SPEN-204ENST00000471538 PRAMEF6Q5VXH4 476 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 SLC35E4Q6ICL7 350 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 ZNF474Q6S9Z5 364 aaPredicted RBP5.39□□□□□ -1.55
SPEN-204ENST00000471538 CLEC9AQ6UXN8 241 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 WDR82Q6UXN9 313 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 ACP7Q6ZNF0 438 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 ZNF826PQ6ZT77 177 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 BEND4Q6ZU67 534 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 ZNF295-AS1Q8N0V1 137 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 RPRMLQ8N4K4 120 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 OR2C3Q8N628 320 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 BOLLQ8N9W6 283 aaKnown RBP5.39□□□□□ -1.55
SPEN-204ENST00000471538 GPR146Q96CH1 333 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 LRRC46Q96FV0 321 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 COQ2Q96H96 371 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 TSNAXQ99598 290 aaKnown RBP5.39□□□□□ -1.55
SPEN-204ENST00000471538 PARP12Q9H0J9 701 aaKnown RBP5.39□□□□□ -1.55
SPEN-204ENST00000471538 ZC4H2Q9NQZ6 224 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 LYRM2Q9NU23 88 aaPredicted RBP5.39□□□□□ -1.55
SPEN-204ENST00000471538 ERRFI1Q9UJM3 462 aaPredicted RBP5.39□□□□□ -1.55
SPEN-204ENST00000471538 RNF115Q9Y4L5 304 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 SPEF1Q9Y4P9 236 aa5.39□□□□□ -1.55
SPEN-204ENST00000471538 PRRC2CQ9Y520 2896 aaKnown RBP5.38□□□□□ -1.55
SPEN-204ENST00000471538 POLQO75417 2590 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 DNHD1Q96M86 4753 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 BORCS7-ASMTA0A0B4J1R7 106 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 PIGBOS1A0A0B4J2F0 54 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 IGHV3-64DA0A0J9YX35 117 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 A0A1B0GU03 582 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 SCO2A0A1W2PP80 73 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 TMEM30CPA0ZSE6 113 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 FAM24AA6NFZ4 105 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 C12orf77C9JDV5 145 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 IFNL4K9M1U5 179 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 TIMM8AO60220 97 aaPredicted RBP5.38□□□□□ -1.55
SPEN-204ENST00000471538 FBXO24O75426 580 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 APOC3P02656 99 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 CD5P06127 495 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 DANCRP0C864 163 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 PSG2P11465 335 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 MUC1P15941 1255 aaPredicted RBP5.38□□□□□ -1.55
SPEN-204ENST00000471538 CEACAM8P31997 349 aaPredicted RBP5.38□□□□□ -1.55
SPEN-204ENST00000471538 TIMP3P35625 211 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 CD200P41217 278 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 OR3A1P47881 315 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 PAX9P55771 341 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 NKX6-1P78426 367 aaPredicted RBP5.38□□□□□ -1.55
SPEN-204ENST00000471538 BLOC1S1P78537 153 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 GNMTQ14749 295 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 EIF2S3LQ2VIR3 472 aaKnown RBP5.38□□□□□ -1.55
SPEN-204ENST00000471538 ZNF718Q3SXZ3 478 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 ZNF585BQ52M93 769 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 TIMM23BQ5SRD1 257 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 C1orf185Q5T7R7 199 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 HIST2H2BCQ6DN03 193 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 FIP1L1Q6UN15 594 aaKnown RBP5.38□□□□□ -1.55
SPEN-204ENST00000471538 Q6ZRG5 221 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 SPAG16Q8N0X2 631 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 TMEM252Q8N6L7 170 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 TMEM171Q8WVE6 324 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 IL1F10Q8WWZ1 152 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 LSM10Q969L4 123 aaKnown RBP5.38□□□□□ -1.55
SPEN-204ENST00000471538 C5orf30Q96GV9 206 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 SCRT1Q9BWW7 348 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 PLEKHF2Q9H8W4 249 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 SEBOXQ9HB31 216 aaPredicted RBP5.38□□□□□ -1.55
SPEN-204ENST00000471538 TRAPPC2LQ9UL33 140 aa5.38□□□□□ -1.55
SPEN-204ENST00000471538 OTOGQ6ZRI0 2925 aa5.37□□□□□ -1.55
SPEN-204ENST00000471538 CHD3Q12873 2000 aaKnown RBP5.37□□□□□ -1.55
SPEN-204ENST00000471538 C9JQL5 133 aa5.37□□□□□ -1.55
SPEN-204ENST00000471538 MKRN2OSH3BPM6 223 aa5.37□□□□□ -1.55
SPEN-204ENST00000471538 K7N7A8 449 aa5.37□□□□□ -1.55
SPEN-204ENST00000471538 SSSCA1O60232 199 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms