RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 ZNF596Q8TC21 504 aa11.98□□□□□ -0.49
COL9A3-209ENST00000469852 SMIM4Q8WVI0 70 aa11.98□□□□□ -0.49
COL9A3-209ENST00000469852 YPEL2Q96QA6 119 aa11.98□□□□□ -0.49
COL9A3-209ENST00000469852 MMP28Q9H239 520 aa11.98□□□□□ -0.49
COL9A3-209ENST00000469852 LY6LH3BQJ8 138 aa11.97□□□□□ -0.49
COL9A3-209ENST00000469852 BUB1B-PAK6H3BSN5 160 aa11.97□□□□□ -0.49
COL9A3-209ENST00000469852 GABARAPH6UMI1 98 aa11.97□□□□□ -0.49
COL9A3-209ENST00000469852 TOR1AO14656 332 aa11.97□□□□□ -0.49
COL9A3-209ENST00000469852 ST8SIA5O15466 376 aa11.97□□□□□ -0.49
COL9A3-209ENST00000469852 HSPA12AO43301 675 aa11.97□□□□□ -0.49
COL9A3-209ENST00000469852 FAM157CP0CG43 387 aa11.97□□□□□ -0.49
COL9A3-209ENST00000469852 ZBTB25P24278 435 aa11.97□□□□□ -0.49
COL9A3-209ENST00000469852 HLA-DMAP28067 261 aa11.97□□□□□ -0.49
COL9A3-209ENST00000469852 ETV6P41212 452 aa11.97□□□□□ -0.49
COL9A3-209ENST00000469852 SLC25A48Q6ZT89 311 aaKnown RBP11.97□□□□□ -0.49
COL9A3-209ENST00000469852 MFSD4AQ8N468 514 aa11.97□□□□□ -0.49
COL9A3-209ENST00000469852 LINC00311Q8N616 119 aa11.97□□□□□ -0.49
COL9A3-209ENST00000469852 FCAMRQ8WWV6 532 aa11.97□□□□□ -0.49
COL9A3-209ENST00000469852 TOLLIPQ9H0E2 274 aa11.97□□□□□ -0.49
COL9A3-209ENST00000469852 RDH8Q9NYR8 311 aa11.97□□□□□ -0.49
COL9A3-209ENST00000469852 MTFP1Q9UDX5 166 aa11.97□□□□□ -0.49
COL9A3-209ENST00000469852 GSTZ1O43708 216 aaPredicted RBP11.96□□□□□ -0.49
COL9A3-209ENST00000469852 PMP2P02689 132 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 NFYAP23511 347 aaPredicted RBP11.96□□□□□ -0.49
COL9A3-209ENST00000469852 RCVRNP35243 200 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 RFX2P48378 723 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 PRRX1P54821 245 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 LGALS4P56470 323 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 BPIFB3P59826 476 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 ARPC4P59998 168 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 Q3ZCU0 254 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 PLA1AQ53H76 456 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 PYDC2Q56P42 97 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 LY6G6FQ5SQ64 297 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 ODF3L1Q8IXM7 274 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 H1FOOQ8IZA3 346 aaPredicted RBP11.96□□□□□ -0.49
COL9A3-209ENST00000469852 SIGLECL1Q8N7X8 197 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 C8orf31Q8N9H6 132 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 OR5AP2Q8NGF4 316 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 OR10J5Q8NHC4 309 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 C15orf40Q8WUR7 153 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 SDHCQ99643 169 aaPredicted RBP11.96□□□□□ -0.49
COL9A3-209ENST00000469852 AGMATQ9BSE5 352 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 ABHD14AQ9BUJ0 271 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 SRRQ9GZT4 340 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 C11orf54Q9H0W9 315 aaPredicted RBP11.96□□□□□ -0.49
COL9A3-209ENST00000469852 IFI27L2Q9H2X8 130 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 RBMX2Q9Y388 322 aaKnown RBP11.96□□□□□ -0.49
COL9A3-209ENST00000469852 TBL2Q9Y4P3 447 aaKnown RBP11.96□□□□□ -0.49
COL9A3-209ENST00000469852 HILPDAQ9Y5L2 63 aa11.96□□□□□ -0.49
COL9A3-209ENST00000469852 FBN1P35555 2871 aaKnown RBP11.95□□□□□ -0.5
COL9A3-209ENST00000469852 RBBP9O75884 186 aa11.95□□□□□ -0.5
COL9A3-209ENST00000469852 DIRAS3O95661 229 aa11.95□□□□□ -0.5
COL9A3-209ENST00000469852 HTR1DP28221 377 aa11.95□□□□□ -0.5
COL9A3-209ENST00000469852 HRH1P35367 487 aa11.95□□□□□ -0.5
COL9A3-209ENST00000469852 MRPS10P82664 201 aaKnown RBP11.95□□□□□ -0.5
COL9A3-209ENST00000469852 CDK10Q15131 360 aa11.95□□□□□ -0.5
COL9A3-209ENST00000469852 SSX2Q16385 188 aa11.95□□□□□ -0.5
COL9A3-209ENST00000469852 SPANXN2Q5MJ10 180 aa11.95□□□□□ -0.5
COL9A3-209ENST00000469852 TPTE2P1Q5T6R2 138 aa11.95□□□□□ -0.5
COL9A3-209ENST00000469852 OR2AK2Q8NG84 335 aa11.95□□□□□ -0.5
COL9A3-209ENST00000469852 OR10X1Q8NGY0 326 aa11.95□□□□□ -0.5
COL9A3-209ENST00000469852 RBMXL1Q96E39 390 aaKnown RBP11.95□□□□□ -0.5
COL9A3-209ENST00000469852 ABHD14BQ96IU4 210 aa11.95□□□□□ -0.5
COL9A3-209ENST00000469852 GINS4Q9BRT9 223 aa11.95□□□□□ -0.5
COL9A3-209ENST00000469852 AKIP1Q9NQ31 210 aa11.95□□□□□ -0.5
COL9A3-209ENST00000469852 DPM3Q9P2X0 92 aa11.95□□□□□ -0.5
COL9A3-209ENST00000469852 RABL2AQ9UBK7 228 aaPredicted RBP11.95□□□□□ -0.5
COL9A3-209ENST00000469852 RNF150Q9ULK6 438 aa11.95□□□□□ -0.5
COL9A3-209ENST00000469852 RABL2BQ9UNT1 228 aa11.95□□□□□ -0.5
COL9A3-209ENST00000469852 IGKV1D-13A0A0B4J2D9 117 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 J3QRK9 145 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 M0QYG6 137 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 RGS11O94810 467 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 CD3DP04234 171 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 OR5H8P0DN80 308 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 IGKV1-13P0DP09 117 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 OR3A3P47888 321 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 REG1BP48304 166 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 MINOS1Q5TGZ0 78 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 OVCH2Q7RTZ1 564 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 LYG1Q8N1E2 194 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 OR4D10Q8NGI6 311 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 TRIM63Q969Q1 353 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 ST6GALNAC6Q969X2 333 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 C5orf30Q96GV9 206 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 PRDM13Q9H4Q3 707 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 OCEL1Q9H607 264 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 NECAP2Q9NVZ3 263 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 EHFQ9NZC4 300 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 MINOS1-NBL1R4GNA1 71 aa11.94□□□□□ -0.5
COL9A3-209ENST00000469852 SAA2-SAA4A0A096LPE2 208 aa11.93□□□□□ -0.5
COL9A3-209ENST00000469852 LEUTXA8MZ59 168 aa11.93□□□□□ -0.5
COL9A3-209ENST00000469852 TUSC2O75896 110 aa11.93□□□□□ -0.5
COL9A3-209ENST00000469852 FBP1P09467 338 aa11.93□□□□□ -0.5
COL9A3-209ENST00000469852 CTXN2P0C2S0 81 aa11.93□□□□□ -0.5
COL9A3-209ENST00000469852 OR8U9P0C7N5 309 aa11.93□□□□□ -0.5
COL9A3-209ENST00000469852 SAA2P0DJI9 122 aaPredicted RBP11.93□□□□□ -0.5
COL9A3-209ENST00000469852 AADACP22760 399 aa11.93□□□□□ -0.5
COL9A3-209ENST00000469852 PTBP1P26599 531 aaKnown RBP eCLIP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms