RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 ISOC1Q96CN7 298 aa10.07□□□□□ -0.8
PTPN7-207ENST00000468385 ABHD14AQ9BUJ0 271 aa10.07□□□□□ -0.8
PTPN7-207ENST00000468385 SPACA1Q9HBV2 294 aa10.07□□□□□ -0.8
PTPN7-207ENST00000468385 OR2S2Q9NQN1 319 aa10.07□□□□□ -0.8
PTPN7-207ENST00000468385 C19orf73Q9NVV2 129 aa10.07□□□□□ -0.8
PTPN7-207ENST00000468385 MRPS28Q9Y2Q9 187 aaKnown RBP10.07□□□□□ -0.8
PTPN7-207ENST00000468385 ORC6Q9Y5N6 252 aa10.07□□□□□ -0.8
PTPN7-207ENST00000468385 GMPPBQ9Y5P6 360 aa10.07□□□□□ -0.8
PTPN7-207ENST00000468385 A8MZ25 164 aa10.06□□□□□ -0.8
PTPN7-207ENST00000468385 SC5DO75845 299 aa10.06□□□□□ -0.8
PTPN7-207ENST00000468385 IGFBP3P17936 291 aaPredicted RBP10.06□□□□□ -0.8
PTPN7-207ENST00000468385 ALDH3A2P51648 485 aa10.06□□□□□ -0.8
PTPN7-207ENST00000468385 CCDC58Q4VC31 144 aa10.06□□□□□ -0.8
PTPN7-207ENST00000468385 RAB12Q6IQ22 244 aa10.06□□□□□ -0.8
PTPN7-207ENST00000468385 RPL22L1Q6P5R6 122 aaKnown RBP10.06□□□□□ -0.8
PTPN7-207ENST00000468385 TRAT1Q6PIZ9 186 aa10.06□□□□□ -0.8
PTPN7-207ENST00000468385 ZNF833PQ6ZTB9 187 aa10.06□□□□□ -0.8
PTPN7-207ENST00000468385 HAPLN4Q86UW8 402 aa10.06□□□□□ -0.8
PTPN7-207ENST00000468385 OR52L2PQ8NGH6 319 aa10.06□□□□□ -0.8
PTPN7-207ENST00000468385 RHOXF1Q8NHV9 184 aa10.06□□□□□ -0.8
PTPN7-207ENST00000468385 ZNF184Q99676 751 aaPredicted RBP10.06□□□□□ -0.8
PTPN7-207ENST00000468385 TAF9BQ9HBM6 251 aa10.06□□□□□ -0.8
PTPN7-207ENST00000468385 MBNL3Q9NUK0 354 aaKnown RBP10.06□□□□□ -0.8
PTPN7-207ENST00000468385 MRPS18AQ9NVS2 196 aaKnown RBP10.06□□□□□ -0.8
PTPN7-207ENST00000468385 FOXA2Q9Y261 457 aaPredicted RBP10.06□□□□□ -0.8
PTPN7-207ENST00000468385 ALMS1Q8TCU4 4167 aa10.06□□□□□ -0.8
PTPN7-207ENST00000468385 EGR2P11161 476 aaPredicted RBP10.05□□□□□ -0.8
PTPN7-207ENST00000468385 OR3A3P47888 321 aa10.05□□□□□ -0.8
PTPN7-207ENST00000468385 VEGFCP49767 419 aa10.05□□□□□ -0.8
PTPN7-207ENST00000468385 PITPNAQ00169 270 aa10.05□□□□□ -0.8
PTPN7-207ENST00000468385 GPR176Q14439 515 aa10.05□□□□□ -0.8
PTPN7-207ENST00000468385 ZNF660Q6AZW8 331 aaPredicted RBP10.05□□□□□ -0.8
PTPN7-207ENST00000468385 LYPD6Q86Y78 171 aa10.05□□□□□ -0.8
PTPN7-207ENST00000468385 OR13C5Q8NGS8 318 aa10.05□□□□□ -0.8
PTPN7-207ENST00000468385 PYDC1Q8WXC3 89 aa10.05□□□□□ -0.8
PTPN7-207ENST00000468385 Q96MT0 163 aa10.05□□□□□ -0.8
PTPN7-207ENST00000468385 OR4C12Q96R67 309 aa10.05□□□□□ -0.8
PTPN7-207ENST00000468385 CST11Q9H112 138 aa10.05□□□□□ -0.8
PTPN7-207ENST00000468385 KIAA1456Q9P272 454 aa10.05□□□□□ -0.8
PTPN7-207ENST00000468385 JPT1Q9UK76 154 aa10.05□□□□□ -0.8
PTPN7-207ENST00000468385 NUBP2Q9Y5Y2 271 aa10.05□□□□□ -0.8
PTPN7-207ENST00000468385 PEX16Q9Y5Y5 336 aa10.05□□□□□ -0.8
PTPN7-207ENST00000468385 HSPA12AO43301 675 aa10.04□□□□□ -0.8
PTPN7-207ENST00000468385 CA11O75493 328 aa10.04□□□□□ -0.8
PTPN7-207ENST00000468385 GPX5O75715 221 aa10.04□□□□□ -0.8
PTPN7-207ENST00000468385 IGLV1-51P01701 117 aa10.04□□□□□ -0.8
PTPN7-207ENST00000468385 IGHV3-11P01762 117 aa10.04□□□□□ -0.8
PTPN7-207ENST00000468385 HSPB1P04792 205 aaKnown RBP10.04□□□□□ -0.8
PTPN7-207ENST00000468385 PPP1CCP36873 323 aaKnown RBP10.04□□□□□ -0.8
PTPN7-207ENST00000468385 CX3CL1P78423 397 aa10.04□□□□□ -0.8
PTPN7-207ENST00000468385 HTD2P86397 168 aa10.04□□□□□ -0.8
PTPN7-207ENST00000468385 LRRC36Q1X8D7 754 aa10.04□□□□□ -0.8
PTPN7-207ENST00000468385 GLIPR1L1Q6UWM5 242 aa10.04□□□□□ -0.8
PTPN7-207ENST00000468385 TCTEX1D1Q8N7M0 179 aa10.04□□□□□ -0.8
PTPN7-207ENST00000468385 MRPL30Q8TCC3 161 aaKnown RBP10.04□□□□□ -0.8
PTPN7-207ENST00000468385 APH1BQ8WW43 257 aa10.04□□□□□ -0.8
PTPN7-207ENST00000468385 MUL1Q969V5 352 aa10.04□□□□□ -0.8
PTPN7-207ENST00000468385 MRPS24Q96EL2 167 aaKnown RBP10.04□□□□□ -0.8
PTPN7-207ENST00000468385 FBXL15Q9H469 300 aa10.04□□□□□ -0.8
PTPN7-207ENST00000468385 ERGIC3Q9Y282 383 aa10.04□□□□□ -0.8
PTPN7-207ENST00000468385 RPL36Q9Y3U8 105 aaKnown RBP10.04□□□□□ -0.8
PTPN7-207ENST00000468385 A3GALT2U3KPV4 340 aa10.04□□□□□ -0.8
PTPN7-207ENST00000468385 TRAV8-7A0A075B6U6 113 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 SAA2-SAA4A0A096LPE2 208 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 TRBV5-5A0A0J9YX44 114 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 UBE2QL1A1L167 161 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 FCN1O00602 326 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 OGG1O15527 345 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 YPEL1O60688 119 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 SAA2P0DJI9 122 aaPredicted RBP10.03□□□□□ -0.8
PTPN7-207ENST00000468385 ETV1P50549 477 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 LY6G6FQ5SQ64 297 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 OR2G6Q5TZ20 316 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 SIGIRRQ6IA17 410 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 CD200R1LQ6Q8B3 271 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 ZNF554Q86TJ5 538 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 SGPP2Q8IWX5 399 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 CBR4Q8N4T8 237 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 FLYWCH2Q96CP2 140 aaKnown RBP10.03□□□□□ -0.8
PTPN7-207ENST00000468385 SMIM19Q96E16 107 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 RHOVQ96L33 236 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 RDH12Q96NR8 316 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 YPEL2Q96QA6 119 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 IFI27L2Q9H2X8 130 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 BANF2Q9H503 90 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 FGF20Q9NP95 211 aaPredicted RBP10.03□□□□□ -0.8
PTPN7-207ENST00000468385 STUB1Q9UNE7 303 aa10.03□□□□□ -0.8
PTPN7-207ENST00000468385 FAM90A7PA6NKC0 464 aa10.02□□□□□ -0.81
PTPN7-207ENST00000468385 FAM90A23PA8MXZ1 464 aa10.02□□□□□ -0.81
PTPN7-207ENST00000468385 H3BNX3 289 aa10.02□□□□□ -0.81
PTPN7-207ENST00000468385 RRHO14718 337 aa10.02□□□□□ -0.81
PTPN7-207ENST00000468385 LALBAP00709 142 aa10.02□□□□□ -0.81
PTPN7-207ENST00000468385 MAS1P04201 325 aa10.02□□□□□ -0.81
PTPN7-207ENST00000468385 GLAP06280 429 aa10.02□□□□□ -0.81
PTPN7-207ENST00000468385 FUT3P21217 361 aa10.02□□□□□ -0.81
PTPN7-207ENST00000468385 RPS11P62280 158 aaKnown RBP eCLIP10.02□□□□□ -0.81
PTPN7-207ENST00000468385 PYHIN1Q6K0P9 492 aa10.02□□□□□ -0.81
PTPN7-207ENST00000468385 FAM71F2Q6NXP2 309 aa10.02□□□□□ -0.81
PTPN7-207ENST00000468385 FAM131AQ6UXB0 335 aa10.02□□□□□ -0.81
PTPN7-207ENST00000468385 JAGN1Q8N5M9 183 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms