RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 CD83Q01151 205 aa9.15□□□□□ -0.94
CDHR3-205ENST00000468143 MOGAT2Q3SYC2 334 aa9.15□□□□□ -0.94
CDHR3-205ENST00000468143 PLAC9Q5JTB6 97 aa9.15□□□□□ -0.94
CDHR3-205ENST00000468143 ZNF880Q6PDB4 577 aa9.15□□□□□ -0.94
CDHR3-205ENST00000468143 ZNF554Q86TJ5 538 aa9.15□□□□□ -0.94
CDHR3-205ENST00000468143 ZNF329Q86UD4 541 aa9.15□□□□□ -0.94
CDHR3-205ENST00000468143 ODF3L1Q8IXM7 274 aa9.15□□□□□ -0.94
CDHR3-205ENST00000468143 YPEL2Q96QA6 119 aa9.15□□□□□ -0.94
CDHR3-205ENST00000468143 ABHD14AQ9BUJ0 271 aa9.15□□□□□ -0.94
CDHR3-205ENST00000468143 YTHDF1Q9BYJ9 559 aaKnown RBP9.15□□□□□ -0.94
CDHR3-205ENST00000468143 IFITM5A6NNB3 132 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 SERPINE3A8MV23 424 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 ST8SIA5O15466 376 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 FGF16O43320 207 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 RGS11O94810 467 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 MOSP00540 346 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 OPN1MWP04001 364 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 SCTP09683 121 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 OPN1MW2P0DN77 364 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 OPN1MW3P0DN78 364 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 ZNF137PP52743 207 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 F2RL1P55085 397 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 KHDC1LQ5JSQ8 128 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 STEAP3Q658P3 488 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 SLC35E3Q7Z769 313 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 NR2C2APQ86WQ0 139 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 IZUMO1Q8IYV9 350 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 Q8N6K4 173 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 Q8N9W7 124 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 OR56B1Q8NGI3 324 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 RITA1Q96K30 269 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 CMSS1Q9BQ75 279 aaKnown RBP9.14□□□□□ -0.95
CDHR3-205ENST00000468143 MRPL20Q9BYC9 149 aaKnown RBP9.14□□□□□ -0.95
CDHR3-205ENST00000468143 PARP12Q9H0J9 701 aaKnown RBP9.14□□□□□ -0.95
CDHR3-205ENST00000468143 Q9N2K0 584 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 PLSCR3Q9NRY6 295 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 TXNL4BQ9NX01 149 aaKnown RBP9.14□□□□□ -0.95
CDHR3-205ENST00000468143 OR1A1Q9P1Q5 309 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 RAB22AQ9UL26 194 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 HSF4Q9ULV5 492 aa9.14□□□□□ -0.95
CDHR3-205ENST00000468143 TET2Q6N021 2002 aaPredicted RBP9.14□□□□□ -0.95
CDHR3-205ENST00000468143 A0A075B6Q4 140 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 TRBV6-6A0A0A6YYG2 114 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 PSMB11A5LHX3 300 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 G3V4G9 280 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 TXNL1O43396 289 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 LANCL1O43813 399 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 CEACAM6P40199 344 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 ZNF773Q6PK81 442 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 OR2AK2Q8NG84 335 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 OR4F17Q8NGA8 305 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 OR4X2Q8NGF9 303 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 FCGR1BQ92637 280 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 RAB3CQ96E17 227 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 OR4F4Q96R69 305 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 S1PR3Q99500 378 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 RASL11BQ9BPW5 248 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 NABP2Q9BQ15 211 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 OR51E2Q9H255 320 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 IFI27L2Q9H2X8 130 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 RIMS4Q9H426 269 aaPredicted RBP9.13□□□□□ -0.95
CDHR3-205ENST00000468143 RNF167Q9H6Y7 350 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 SLC23A1Q9UHI7 598 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 STUB1Q9UNE7 303 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 KCNK7Q9Y2U2 307 aa9.13□□□□□ -0.95
CDHR3-205ENST00000468143 SAA2-SAA4A0A096LPE2 208 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 HSPA12AO43301 675 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 IGHG2P01859 326 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 SAA2P0DJI9 122 aaPredicted RBP9.12□□□□□ -0.95
CDHR3-205ENST00000468143 GNB3P16520 340 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 GALP22466 123 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 CNTFRP26992 372 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 HLA-DRB3P79483 266 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 LSAMPQ13449 338 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 NEDD8Q15843 81 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 RPL39P5Q59GN2 51 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 ZNF833PQ6ZTB9 187 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 MOB1BQ7L9L4 216 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 OR10R2Q8NGX6 335 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 MAFIPQ8WZ33 124 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 ABHD14BQ96IU4 210 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 CHCHD6Q9BRQ6 235 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 ATG5Q9H1Y0 275 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 ABCG5Q9H222 651 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 C12orf4Q9NQ89 552 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 LIN7CQ9NUP9 197 aaKnown RBP9.12□□□□□ -0.95
CDHR3-205ENST00000468143 RNF150Q9ULK6 438 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 SSR3Q9UNL2 185 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 TSSC4Q9Y5U2 329 aaPredicted RBP9.12□□□□□ -0.95
CDHR3-205ENST00000468143 MGAM2Q2M2H8 2515 aa9.12□□□□□ -0.95
CDHR3-205ENST00000468143 TRRAPQ9Y4A5 3859 aa9.11□□□□□ -0.95
CDHR3-205ENST00000468143 IGKV1-6A0A0C4DH72 117 aa9.11□□□□□ -0.95
CDHR3-205ENST00000468143 TRDCB7Z8K6 153 aa9.11□□□□□ -0.95
CDHR3-205ENST00000468143 CD3GP09693 182 aa9.11□□□□□ -0.95
CDHR3-205ENST00000468143 CLEC2LP0C7M8 214 aa9.11□□□□□ -0.95
CDHR3-205ENST00000468143 ZBTB25P24278 435 aa9.11□□□□□ -0.95
CDHR3-205ENST00000468143 FGF9P31371 208 aaPredicted RBP9.11□□□□□ -0.95
CDHR3-205ENST00000468143 RANBP1P43487 201 aa9.11□□□□□ -0.95
CDHR3-205ENST00000468143 GPR12P47775 334 aa9.11□□□□□ -0.95
CDHR3-205ENST00000468143 MRPS15P82914 257 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms