RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 ZFP36P26651 326 aaKnown RBP10.67□□□□□ -0.7
COL4A1-202ENST00000467182 PIGPP57054 158 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 GNB2P62879 340 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 PAX2Q02962 417 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 EIF4EBP1Q13541 118 aaPredicted RBP10.67□□□□□ -0.7
COL4A1-202ENST00000467182 FCN2Q15485 313 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 C2orf68Q2NKX9 166 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 PHLDA2Q53GA4 152 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 LPCAT3Q6P1A2 487 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 BVESQ8NE79 360 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 OR8U1Q8NH10 309 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 DACT3Q96B18 629 aaPredicted RBP10.67□□□□□ -0.7
COL4A1-202ENST00000467182 PIMREGQ9BSJ6 248 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 SSBP3Q9BWW4 388 aaPredicted RBP10.67□□□□□ -0.7
COL4A1-202ENST00000467182 GPN1Q9HCN4 374 aaPredicted RBP10.67□□□□□ -0.7
COL4A1-202ENST00000467182 CRYBG3Q68DQ2 2970 aa10.67□□□□□ -0.7
COL4A1-202ENST00000467182 DOCK11Q5JSL3 2073 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 IGHV4-30-2A0A087WSY4 118 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 PPIAL4CA0A0B4J2A2 164 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 IGHV4-61A0A0C4DH41 118 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 A8MXK9 166 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 ST8SIA5O15466 376 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 CREBL2O60519 120 aaPredicted RBP10.66□□□□□ -0.7
COL4A1-202ENST00000467182 HLA-AP01891 365 aaKnown RBP10.66□□□□□ -0.7
COL4A1-202ENST00000467182 PPIAL4GP0DN37 164 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 CD300CQ08708 224 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 MSMO1Q15800 293 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 C11orf91Q3C1V1 193 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 CT45A1Q5HYN5 189 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 CD276Q5ZPR3 534 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 CLEC2AQ6UVW9 174 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 ZNF645Q8N7E2 425 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 OR11H7Q8NGC8 314 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 CT45A3Q8NHU0 189 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 FAM216AQ8WUB2 273 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 MITD1Q8WV92 249 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 RTN4IP1Q8WWV3 396 aaPredicted RBP10.66□□□□□ -0.7
COL4A1-202ENST00000467182 NINJ1Q92982 152 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 LEAP2Q969E1 77 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 AKR1E2Q96JD6 320 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 IFI27L2Q9H2X8 130 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 NAA60Q9H7X0 242 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 BEX4Q9NWD9 120 aaPredicted RBP10.66□□□□□ -0.7
COL4A1-202ENST00000467182 GNG12Q9UBI6 72 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 VPS13CQ709C8 3753 aa10.66□□□□□ -0.7
COL4A1-202ENST00000467182 MALRD1Q5VYJ5 2156 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 A0A087X0M5 115 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 A0A1B0GX30 115 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 DBX1A6NMT0 343 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 PROP1O75360 226 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 PGLYRP1O75594 196 aaPredicted RBP10.65□□□□□ -0.7
COL4A1-202ENST00000467182 RGS11O94810 467 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 DUS4LO95620 317 aaKnown RBP10.65□□□□□ -0.7
COL4A1-202ENST00000467182 CXCL3P19876 107 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 DEFB113Q30KQ7 82 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 ANKRD55Q3KP44 614 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 ABCA11PQ4W5N1 156 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 ESCO2Q56NI9 601 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 C1orf229Q6ZS94 237 aaPredicted RBP10.65□□□□□ -0.7
COL4A1-202ENST00000467182 TBC1D26Q86UD7 250 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 ODF3L1Q8IXM7 274 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 LRRC75A-AS1Q8N1F1 130 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 C12orf45Q8N5I9 185 aaPredicted RBP10.65□□□□□ -0.7
COL4A1-202ENST00000467182 DRAM1Q8N682 238 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 Q8N7P7 452 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 ZNF596Q8TC21 504 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 EDARADDQ8WWZ3 215 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 GALNT14Q96FL9 552 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 ST6GAL2Q96JF0 529 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 GPHA2Q96T91 129 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 MED28Q9H204 178 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 OR2D2Q9H210 308 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 PRR13Q9NZ81 148 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 RNF150Q9ULK6 438 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 PSG11Q9UQ72 335 aa10.65□□□□□ -0.7
COL4A1-202ENST00000467182 YLPM1P49750 1951 aaKnown RBP10.65□□□□□ -0.71
COL4A1-202ENST00000467182 CELSR2Q9HCU4 2923 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 LOC105371242A0A075B767 164 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 A0A096LNT2 108 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 A0A0B4J2A0 478 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 FAM157AC9JC47 383 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 MPPED1O15442 326 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 IGHV3-7P01780 117 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 RBP4P02753 201 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 IGHV1-8P0DP01 117 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 VAMP1P23763 118 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 NFYBP25208 207 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 DSCR9P59020 149 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 TMEM187Q14656 261 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 SLC9A3R2Q15599 337 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 Q3ZCU0 254 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 SLC25A48Q6ZT89 311 aaKnown RBP10.64□□□□□ -0.71
COL4A1-202ENST00000467182 CCDC71LQ8N9Z2 235 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 OR2AK2Q8NG84 335 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 CASTOR1Q8WTX7 329 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 MBD6Q96DN6 1003 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 ABHD14BQ96IU4 210 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 TP53RKQ96S44 253 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 ABHD14AQ9BUJ0 271 aa10.64□□□□□ -0.71
COL4A1-202ENST00000467182 SDHAF2Q9NX18 166 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms