RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 SLC23A1Q9UHI7 598 aa5.64□□□□□ -1.51
CLDN4-204ENST00000466411 UBE2QL1A1L167 161 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 MEIOCA2RUB1 952 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 VGLL3A8MV65 326 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 ODF3BA8MYP8 253 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 C12orf77C9JDV5 145 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 RNASEK-C17orf49H0YIS7 233 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 SDCBPO00560 298 aaPredicted RBP5.63□□□□□ -1.51
CLDN4-204ENST00000466411 SOCS1O15524 211 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 RGS5O15539 181 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 HSPA12AO43301 675 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 YPEL1O60688 119 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 FCN3O75636 299 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 PRB2P02812 416 aaPredicted RBP5.63□□□□□ -1.51
CLDN4-204ENST00000466411 ARG1P05089 322 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 FCGR3AP08637 254 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 CGB3P0DN86 165 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 CGB7P0DN87 165 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 CCL3L1P16619 93 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 TBPP20226 339 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 PTBP1P26599 531 aaKnown RBP eCLIP5.63□□□□□ -1.51
CLDN4-204ENST00000466411 HTR1DP28221 377 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 SAA4P35542 130 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 DYNLT3P51808 116 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 TAS2R46P59540 309 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 HLA-DRB3P79483 266 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 MADCAM1Q13477 382 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 HMGN3Q15651 99 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 CDNFQ49AH0 187 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 ACTBL2Q562R1 376 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 CCBE1Q6UXH8 406 aaPredicted RBP5.63□□□□□ -1.51
CLDN4-204ENST00000466411 TCF23Q7RTU1 214 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 ABHD12Q8N2K0 398 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 LINC00311Q8N616 119 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 OR2AK2Q8NG84 335 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 OR13A1Q8NGR1 328 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 OR10X1Q8NGY0 326 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 OR10J5Q8NHC4 309 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 NDNFQ8TB73 568 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 DYNC2LI1Q8TCX1 351 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 DEDD2Q8WXF8 326 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 AKR1E2Q96JD6 320 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 YPEL2Q96QA6 119 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 LYSTQ99698 3801 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 NKX3-1Q99801 234 aaPredicted RBP5.63□□□□□ -1.51
CLDN4-204ENST00000466411 FAAP24Q9BTP7 215 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 MMP28Q9H239 520 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 RNF167Q9H6Y7 350 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 IFT46Q9NQC8 304 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 SIRT7Q9NRC8 400 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 ABCB10Q9NRK6 738 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 PIPOXQ9P0Z9 390 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 COMMD3Q9UBI1 195 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 ZNF107Q9UII5 783 aaPredicted RBP5.63□□□□□ -1.51
CLDN4-204ENST00000466411 AK3Q9UIJ7 227 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 CEPT1Q9Y6K0 416 aa5.63□□□□□ -1.51
CLDN4-204ENST00000466411 A0A0A6YYD4 124 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 SMIM30A4D0T7 59 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 FAM25AB3EWG3 89 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 FAM25CB3EWG5 89 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 FAM25GB3EWG6 89 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 TRDCB7Z8K6 153 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 C15orf65H3BRN8 121 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 IGLV1-47P01700 117 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 HBZP02008 142 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 TFF1P04155 84 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 CLEC2LP0C7M8 214 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 IGHV4-38-2P0DP08 117 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 GNB3P16520 340 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 NFYBP25208 207 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 PRSS3P35030 304 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 SSTR5P35346 364 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 EFNB2P52799 333 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 TMEM50BP56557 158 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 ARPC4P59998 168 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 C17orf58Q2M2W7 97 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 HLA-DRB5Q30154 266 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 PLAC9Q5JTB6 97 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 PRAMEF5Q5TYX0 476 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 ZNF782Q6ZMW2 699 aaPredicted RBP5.62□□□□□ -1.51
CLDN4-204ENST00000466411 C16orf82Q7Z2V1 217 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 OR8H3Q8N146 312 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 PNKDQ8N490 385 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 C11orf42Q8N5U0 333 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 TPRX1Q8N7U7 411 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.62□□□□□ -1.51
CLDN4-204ENST00000466411 OR4K15Q8NH41 348 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 MCFD2Q8NI22 146 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 SETD6Q8TBK2 473 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 TAF15Q92804 592 aaKnown RBP eCLIP5.62□□□□□ -1.51
CLDN4-204ENST00000466411 SLC25A38Q96DW6 304 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 S1PR3Q99500 378 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 GINS4Q9BRT9 223 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 CABLES2Q9BTV7 478 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 RBM38Q9H0Z9 239 aaKnown RBP5.62□□□□□ -1.51
CLDN4-204ENST00000466411 AUNIPQ9H7T9 357 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 Q9N2K0 584 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 OR2S2Q9NQN1 319 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 TAS2R8Q9NYW2 309 aa5.62□□□□□ -1.51
CLDN4-204ENST00000466411 DPM3Q9P2X0 92 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms