RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 NINJ1Q92982 152 aa16.9■□□□□ 0.3
CCM2-203ENST00000461377 C5orf30Q96GV9 206 aa16.9■□□□□ 0.3
CCM2-203ENST00000461377 SNX22Q96L94 193 aa16.9■□□□□ 0.3
CCM2-203ENST00000461377 SLC25A31Q9H0C2 315 aa16.9■□□□□ 0.3
CCM2-203ENST00000461377 OR2D2Q9H210 308 aa16.9■□□□□ 0.3
CCM2-203ENST00000461377 LAMA5O15230 3695 aa16.9■□□□□ 0.3
CCM2-203ENST00000461377 IGHV3OR15-7A0A075B7D8 119 aa16.89■□□□□ 0.3
CCM2-203ENST00000461377 KIAA1324LA8MWY0 1029 aaPredicted RBP16.89■□□□□ 0.3
CCM2-203ENST00000461377 C15orf65H3BRN8 121 aa16.89■□□□□ 0.3
CCM2-203ENST00000461377 IGKV1-5P01602 117 aa16.89■□□□□ 0.3
CCM2-203ENST00000461377 ZNF16P17020 682 aaPredicted RBP16.89■□□□□ 0.3
CCM2-203ENST00000461377 M6PRP20645 277 aa16.89■□□□□ 0.3
CCM2-203ENST00000461377 TMEM108Q6UXF1 575 aa16.89■□□□□ 0.3
CCM2-203ENST00000461377 RNASE11Q8TAA1 199 aaKnown RBP16.89■□□□□ 0.3
CCM2-203ENST00000461377 SH3BGRL2Q9UJC5 107 aa16.89■□□□□ 0.3
CCM2-203ENST00000461377 CHST1O43916 411 aa16.89■□□□□ 0.29
CCM2-203ENST00000461377 SPP1P10451 314 aa16.89■□□□□ 0.29
CCM2-203ENST00000461377 PPP1CCP36873 323 aaKnown RBP16.89■□□□□ 0.29
CCM2-203ENST00000461377 BLOC1S1P78537 153 aa16.89■□□□□ 0.29
CCM2-203ENST00000461377 Q6ZRM9 215 aa16.89■□□□□ 0.29
CCM2-203ENST00000461377 ODF3L1Q8IXM7 274 aa16.89■□□□□ 0.29
CCM2-203ENST00000461377 PPP1R35Q8TAP8 253 aa16.89■□□□□ 0.29
CCM2-203ENST00000461377 RNF150Q9ULK6 438 aa16.89■□□□□ 0.29
CCM2-203ENST00000461377 WRBO00258 174 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 MGST3O14880 152 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 GFRA3O60609 400 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 NXPH3O95157 252 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 IGHV1-46P01743 117 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 PAX9P55771 341 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 HTD2P86397 168 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 PJVKQ0ZLH3 352 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 EDDM3AQ14507 147 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 DCTN5Q9BTE1 182 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 PARP11Q9NR21 331 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 IL19Q9UHD0 177 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 CHD3Q12873 2000 aaKnown RBP16.88■□□□□ 0.29
CCM2-203ENST00000461377 ODAMA1E959 279 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 SPINT2O43291 252 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 PTAFRP25105 342 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 AKR1C2P52895 323 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 IZUMO4Q1ZYL8 232 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 BTNL8Q6UX41 500 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 SUN5Q8TC36 379 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 FAM222BQ8WU58 562 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 ESRP2Q9H6T0 727 aaKnown RBP16.88■□□□□ 0.29
CCM2-203ENST00000461377 FAM212BQ9NTI7 297 aaPredicted RBP16.88■□□□□ 0.29
CCM2-203ENST00000461377 CACNG5Q9UF02 275 aa16.88■□□□□ 0.29
CCM2-203ENST00000461377 THBDP07204 575 aa16.87■□□□□ 0.29
CCM2-203ENST00000461377 ADH4P08319 380 aa16.87■□□□□ 0.29
CCM2-203ENST00000461377 FAM87AP0C7U9 286 aa16.87■□□□□ 0.29
CCM2-203ENST00000461377 TMPRSS3P57727 454 aa16.87■□□□□ 0.29
CCM2-203ENST00000461377 TNFAIP6P98066 277 aaPredicted RBP16.87■□□□□ 0.29
CCM2-203ENST00000461377 BAXQ07812 192 aa16.87■□□□□ 0.29
CCM2-203ENST00000461377 CR1LQ2VPA4 569 aa16.87■□□□□ 0.29
CCM2-203ENST00000461377 WFDC8Q8IUA0 241 aa16.87■□□□□ 0.29
CCM2-203ENST00000461377 HRH4Q9H3N8 390 aa16.87■□□□□ 0.29
CCM2-203ENST00000461377 ASCL1P50553 236 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 ZNF295-AS1Q8N0V1 137 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 RFESDQ8TAC1 157 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 RNF7Q9UBF6 113 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 TMA7Q9Y2S6 64 aaKnown RBP16.86■□□□□ 0.29
CCM2-203ENST00000461377 IGHV3-43A0A0B4J1X8 118 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 TMEM218A2RU14 115 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 DPRXA6NFQ7 191 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 K7N7A8 449 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 IGHV3-43DP0DP04 118 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 GZMHP20718 246 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 CD80P33681 288 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 RPL30P62888 115 aaKnown RBP16.86■□□□□ 0.29
CCM2-203ENST00000461377 RBPJQ06330 500 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 ZNF266Q14584 549 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 Q6ZRG5 221 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 SSX8Q7RTT4 187 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 ZNF808Q8N4W9 903 aaPredicted RBP16.86■□□□□ 0.29
CCM2-203ENST00000461377 NARS2Q96I59 477 aaKnown RBP16.86■□□□□ 0.29
CCM2-203ENST00000461377 RAB40CQ96S21 281 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 MS4A7Q9GZW8 240 aaPredicted RBP16.86■□□□□ 0.29
CCM2-203ENST00000461377 GCM1Q9NP62 436 aa16.86■□□□□ 0.29
CCM2-203ENST00000461377 B8ZZF3 427 aa16.85■□□□□ 0.29
CCM2-203ENST00000461377 APOC3P02656 99 aa16.85■□□□□ 0.29
CCM2-203ENST00000461377 DANCRP0C864 163 aa16.85■□□□□ 0.29
CCM2-203ENST00000461377 OMGP23515 440 aa16.85■□□□□ 0.29
CCM2-203ENST00000461377 SRSF3P84103 164 aaKnown RBP16.85■□□□□ 0.29
CCM2-203ENST00000461377 FAM209AQ5JX71 171 aa16.85■□□□□ 0.29
CCM2-203ENST00000461377 LYPD6BQ8NI32 183 aa16.85■□□□□ 0.29
CCM2-203ENST00000461377 Q8TCH9 128 aa16.85■□□□□ 0.29
CCM2-203ENST00000461377 ABCD4O14678 606 aa16.84■□□□□ 0.29
CCM2-203ENST00000461377 TNFSF4P23510 183 aa16.84■□□□□ 0.29
CCM2-203ENST00000461377 F2RL1P55085 397 aa16.84■□□□□ 0.29
CCM2-203ENST00000461377 CATR1Q13166 79 aa16.84■□□□□ 0.29
CCM2-203ENST00000461377 CLINT1Q14677 625 aa16.84■□□□□ 0.29
CCM2-203ENST00000461377 SWI5Q1ZZU3 235 aa16.84■□□□□ 0.29
CCM2-203ENST00000461377 HSD17B11Q8NBQ5 300 aa16.84■□□□□ 0.29
CCM2-203ENST00000461377 ZNRF1Q8ND25 227 aa16.84■□□□□ 0.29
CCM2-203ENST00000461377 SH3BGRL3Q9H299 93 aa16.84■□□□□ 0.29
CCM2-203ENST00000461377 KIAA2026Q5HYC2 2103 aa16.84■□□□□ 0.29
CCM2-203ENST00000461377 MEX3AA1L020 520 aaKnown RBP16.84■□□□□ 0.29
CCM2-203ENST00000461377 SIGLEC5O15389 551 aa16.84■□□□□ 0.29
CCM2-203ENST00000461377 DYNLT3P51808 116 aa16.84■□□□□ 0.29
CCM2-203ENST00000461377 AKR1C1Q04828 323 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms