RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 NUDCD2Q8WVJ2 157 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 CITED2Q99967 270 aaPredicted RBP11.78□□□□□ -0.52
NCK1-202ENST00000460960 CLEC7AQ9BXN2 247 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 PARP12Q9H0J9 701 aaKnown RBP11.78□□□□□ -0.52
NCK1-202ENST00000460960 ABCG5Q9H222 651 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 Q9N2K0 584 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 C12orf4Q9NQ89 552 aa11.78□□□□□ -0.52
NCK1-202ENST00000460960 TRAV18A0A075B6X5 111 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 A0A087X0M5 115 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 TRBV6-6A0A0A6YYG2 114 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 IGKV1-6A0A0C4DH72 117 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 A0A1B0GX30 115 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 A0A1W2PRX2 142 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 H3BUI4 141 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 SDCBPO00560 298 aaPredicted RBP11.77□□□□□ -0.53
NCK1-202ENST00000460960 IGLV1-47P01700 117 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 FCGR3AP08637 254 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 SCTP09683 121 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 IGLL1P15814 213 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 ELK1P19419 428 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 UBE2NLQ5JXB2 153 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 C6orf183Q5T699 404 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 NDUFA11Q86Y39 141 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 KCTD12Q96CX2 325 aaKnown RBP11.77□□□□□ -0.53
NCK1-202ENST00000460960 BCL7BQ9BQE9 202 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 MIXL1Q9H2W2 232 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 GFOD1Q9NXC2 390 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 PSG11Q9UQ72 335 aa11.77□□□□□ -0.53
NCK1-202ENST00000460960 DPPA5A6NC42 116 aa11.76□□□□□ -0.53
NCK1-202ENST00000460960 CCDC160A6NGH7 325 aa11.76□□□□□ -0.53
NCK1-202ENST00000460960 CD3GP09693 182 aa11.76□□□□□ -0.53
NCK1-202ENST00000460960 ZNF182P17025 639 aaPredicted RBP11.76□□□□□ -0.53
NCK1-202ENST00000460960 PPP1CCP36873 323 aaKnown RBP11.76□□□□□ -0.53
NCK1-202ENST00000460960 LGALS4P56470 323 aa11.76□□□□□ -0.53
NCK1-202ENST00000460960 DIAPH2-AS1Q14236 149 aa11.76□□□□□ -0.53
NCK1-202ENST00000460960 HACD4Q5VWC8 232 aa11.76□□□□□ -0.53
NCK1-202ENST00000460960 RBMXL1Q96E39 390 aaKnown RBP11.76□□□□□ -0.53
NCK1-202ENST00000460960 ZNF702PQ9H963 129 aa11.76□□□□□ -0.53
NCK1-202ENST00000460960 OR1A1Q9P1Q5 309 aa11.76□□□□□ -0.53
NCK1-202ENST00000460960 SERPINE3A8MV23 424 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 J3QR06 171 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 CTDSP2O14595 271 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 SPINT2O43291 252 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 TMEM127O75204 238 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 FCER2P06734 321 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 ZNF134P52741 427 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 HLA-DRB3P79483 266 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 ARFRP1Q13795 201 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 HLA-DRB5Q30154 266 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 OR52W1Q6IF63 320 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 LIAT1Q6ZQX7 453 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 ZNF439Q8NDP4 499 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 IL1F10Q8WWZ1 152 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 DCUN1D5Q9BTE7 237 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 SLIRPQ9GZT3 109 aaKnown RBP11.75□□□□□ -0.53
NCK1-202ENST00000460960 MEGF9Q9H1U4 602 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 AUNIPQ9H7T9 357 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 KCNIP1Q9NZI2 227 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 HILPDAQ9Y5L2 63 aa11.75□□□□□ -0.53
NCK1-202ENST00000460960 MEIS3P1A6NDR6 274 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 LY6LH3BQJ8 138 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 K7EIL1 84 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 XRCC3O43542 346 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 NOL3O60936 208 aaKnown RBP11.74□□□□□ -0.53
NCK1-202ENST00000460960 GSTP1P09211 210 aaKnown RBP11.74□□□□□ -0.53
NCK1-202ENST00000460960 GSTT2P0CG29 244 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 GSTT2BP0CG30 244 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 PF4V1P10720 104 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 TAS2R20P59543 309 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 SSX2Q16385 188 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 IGSF11Q5DX21 431 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 TRAT1Q6PIZ9 186 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 TMEM219Q86XT9 240 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 LAX1Q8IWV1 398 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 GVQW1Q8N7I0 195 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 OR10A7Q8NGE5 316 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 OR52M1Q8NGK5 317 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 OR9G1Q8NH87 305 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 RIMS4Q9H426 269 aaPredicted RBP11.74□□□□□ -0.53
NCK1-202ENST00000460960 OR2S2Q9NQN1 319 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 ABCB10Q9NRK6 738 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 SERTAD4Q9NUC0 356 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 CCDC59Q9P031 241 aaKnown RBP11.74□□□□□ -0.53
NCK1-202ENST00000460960 GNG12Q9UBI6 72 aa11.74□□□□□ -0.53
NCK1-202ENST00000460960 RSL24D1Q9UHA3 163 aaKnown RBP11.74□□□□□ -0.53
NCK1-202ENST00000460960 TRDCB7Z8K6 153 aa11.73□□□□□ -0.53
NCK1-202ENST00000460960 BUB1B-PAK6H3BSN5 160 aa11.73□□□□□ -0.53
NCK1-202ENST00000460960 APOA1P02647 267 aa11.73□□□□□ -0.53
NCK1-202ENST00000460960 RAB13P51153 203 aa11.73□□□□□ -0.53
NCK1-202ENST00000460960 AANATQ16613 207 aa11.73□□□□□ -0.53
NCK1-202ENST00000460960 MORN2Q502X0 79 aa11.73□□□□□ -0.53
NCK1-202ENST00000460960 CT45A1Q5HYN5 189 aa11.73□□□□□ -0.53
NCK1-202ENST00000460960 CCBE1Q6UXH8 406 aaPredicted RBP11.73□□□□□ -0.53
NCK1-202ENST00000460960 MOB1BQ7L9L4 216 aa11.73□□□□□ -0.53
NCK1-202ENST00000460960 ZNF554Q86TJ5 538 aa11.73□□□□□ -0.53
NCK1-202ENST00000460960 CT45A3Q8NHU0 189 aa11.73□□□□□ -0.53
NCK1-202ENST00000460960 PIFOQ8TCI5 191 aa11.73□□□□□ -0.53
NCK1-202ENST00000460960 ACOT12Q8WYK0 555 aa11.73□□□□□ -0.53
NCK1-202ENST00000460960 S100A16Q96FQ6 103 aaKnown RBP11.73□□□□□ -0.53
NCK1-202ENST00000460960 DIABLOQ9NR28 239 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms