RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 LCNL1Q6ZST4 164 aa17.84■□□□□ 0.45
PTPN4-207ENST00000460162 LRRTM1Q86UE6 522 aa17.84■□□□□ 0.45
PTPN4-207ENST00000460162 ODF3L1Q8IXM7 274 aa17.84■□□□□ 0.45
PTPN4-207ENST00000460162 SULT4A1Q9BR01 284 aa17.84■□□□□ 0.45
PTPN4-207ENST00000460162 CHCHD6Q9BRQ6 235 aa17.84■□□□□ 0.45
PTPN4-207ENST00000460162 SLC2A2P11168 524 aaPredicted RBP17.83■□□□□ 0.44
PTPN4-207ENST00000460162 MYF6P23409 242 aa17.83■□□□□ 0.44
PTPN4-207ENST00000460162 PSMB8P28062 276 aa17.83■□□□□ 0.44
PTPN4-207ENST00000460162 RAB25P57735 213 aa17.83■□□□□ 0.44
PTPN4-207ENST00000460162 DEFB136Q30KP8 78 aa17.83■□□□□ 0.44
PTPN4-207ENST00000460162 ZNF833PQ6ZTB9 187 aa17.83■□□□□ 0.44
PTPN4-207ENST00000460162 OR2AK2Q8NG84 335 aa17.83■□□□□ 0.44
PTPN4-207ENST00000460162 OR5M8Q8NGP6 311 aa17.83■□□□□ 0.44
PTPN4-207ENST00000460162 C4orf3Q8WVX3 66 aa17.83■□□□□ 0.44
PTPN4-207ENST00000460162 KCTD7Q96MP8 289 aa17.83■□□□□ 0.44
PTPN4-207ENST00000460162 TMED9Q9BVK6 235 aa17.83■□□□□ 0.44
PTPN4-207ENST00000460162 TM2D1Q9BX74 207 aa17.83■□□□□ 0.44
PTPN4-207ENST00000460162 MRPL20Q9BYC9 149 aaKnown RBP17.83■□□□□ 0.44
PTPN4-207ENST00000460162 ABRACLQ9P1F3 81 aa17.83■□□□□ 0.44
PTPN4-207ENST00000460162 LSM2Q9Y333 95 aaKnown RBP17.83■□□□□ 0.44
PTPN4-207ENST00000460162 HLA-DRB1P01911 266 aa17.82■□□□□ 0.44
PTPN4-207ENST00000460162 ACTBP60709 375 aa17.82■□□□□ 0.44
PTPN4-207ENST00000460162 DGCR2P98153 550 aa17.82■□□□□ 0.44
PTPN4-207ENST00000460162 SPHARQ15513 63 aa17.82■□□□□ 0.44
PTPN4-207ENST00000460162 HSD17B12Q53GQ0 312 aa17.82■□□□□ 0.44
PTPN4-207ENST00000460162 OR10K2Q6IF99 312 aa17.82■□□□□ 0.44
PTPN4-207ENST00000460162 FAM71F2Q6NXP2 309 aa17.82■□□□□ 0.44
PTPN4-207ENST00000460162 SVOPQ8N4V2 548 aa17.82■□□□□ 0.44
PTPN4-207ENST00000460162 KCNG3Q8TAE7 436 aa17.82■□□□□ 0.44
PTPN4-207ENST00000460162 RBMXL1Q96E39 390 aaKnown RBP17.82■□□□□ 0.44
PTPN4-207ENST00000460162 NABP2Q9BQ15 211 aa17.82■□□□□ 0.44
PTPN4-207ENST00000460162 SAA2-SAA4A0A096LPE2 208 aa17.81■□□□□ 0.44
PTPN4-207ENST00000460162 SAA2P0DJI9 122 aaPredicted RBP17.81■□□□□ 0.44
PTPN4-207ENST00000460162 HTR2CP28335 458 aa17.81■□□□□ 0.44
PTPN4-207ENST00000460162 CD69Q07108 199 aa17.81■□□□□ 0.44
PTPN4-207ENST00000460162 MOB1BQ7L9L4 216 aa17.81■□□□□ 0.44
PTPN4-207ENST00000460162 C6orf201Q7Z4U5 140 aa17.81■□□□□ 0.44
PTPN4-207ENST00000460162 MYOZ3Q8TDC0 251 aa17.81■□□□□ 0.44
PTPN4-207ENST00000460162 B9D2Q9BPU9 175 aa17.81■□□□□ 0.44
PTPN4-207ENST00000460162 IFI27L2Q9H2X8 130 aa17.81■□□□□ 0.44
PTPN4-207ENST00000460162 STEAP1Q9UHE8 339 aa17.81■□□□□ 0.44
PTPN4-207ENST00000460162 SLC22A1O15245 554 aa17.8■□□□□ 0.44
PTPN4-207ENST00000460162 NBR2O15453 112 aa17.8■□□□□ 0.44
PTPN4-207ENST00000460162 RAMP3O60896 148 aa17.8■□□□□ 0.44
PTPN4-207ENST00000460162 UNC119Q13432 240 aa17.8■□□□□ 0.44
PTPN4-207ENST00000460162 FHL3Q13643 280 aa17.8■□□□□ 0.44
PTPN4-207ENST00000460162 C11orf87Q6NUJ2 197 aa17.8■□□□□ 0.44
PTPN4-207ENST00000460162 C5orf24Q7Z6I8 188 aa17.8■□□□□ 0.44
PTPN4-207ENST00000460162 OR6M1Q8NGM8 313 aa17.8■□□□□ 0.44
PTPN4-207ENST00000460162 ZNF251Q9BRH9 671 aa17.8■□□□□ 0.44
PTPN4-207ENST00000460162 FAAP24Q9BTP7 215 aa17.8■□□□□ 0.44
PTPN4-207ENST00000460162 SCN3BQ9NY72 215 aa17.8■□□□□ 0.44
PTPN4-207ENST00000460162 TMEM14DPA8MWL7 114 aa17.79■□□□□ 0.44
PTPN4-207ENST00000460162 BPNT1O95861 308 aa17.79■□□□□ 0.44
PTPN4-207ENST00000460162 NAPSAO96009 420 aa17.79■□□□□ 0.44
PTPN4-207ENST00000460162 UCHL1P09936 223 aa17.79■□□□□ 0.44
PTPN4-207ENST00000460162 CD37P11049 281 aa17.79■□□□□ 0.44
PTPN4-207ENST00000460162 SRMP19623 302 aa17.79■□□□□ 0.44
PTPN4-207ENST00000460162 MED22Q15528 200 aa17.79■□□□□ 0.44
PTPN4-207ENST00000460162 C9orf66Q5T8R8 295 aa17.79■□□□□ 0.44
PTPN4-207ENST00000460162 ZNF880Q6PDB4 577 aa17.79■□□□□ 0.44
PTPN4-207ENST00000460162 CEACAM19Q7Z692 300 aa17.79■□□□□ 0.44
PTPN4-207ENST00000460162 IL1F10Q8WWZ1 152 aa17.79■□□□□ 0.44
PTPN4-207ENST00000460162 NICN1Q9BSH3 213 aa17.79■□□□□ 0.44
PTPN4-207ENST00000460162 OR51J1Q9H342 316 aa17.79■□□□□ 0.44
PTPN4-207ENST00000460162 PIPOXQ9P0Z9 390 aa17.79■□□□□ 0.44
PTPN4-207ENST00000460162 DNAH9Q9NYC9 4486 aa17.78■□□□□ 0.44
PTPN4-207ENST00000460162 PTGES3LE9PB15 166 aa17.78■□□□□ 0.44
PTPN4-207ENST00000460162 ATP6V0E1O15342 81 aa17.78■□□□□ 0.44
PTPN4-207ENST00000460162 NDUFA3O95167 84 aa17.78■□□□□ 0.44
PTPN4-207ENST00000460162 PPIFP30405 207 aaKnown RBP17.78■□□□□ 0.44
PTPN4-207ENST00000460162 OR3A3P47888 321 aa17.78■□□□□ 0.44
PTPN4-207ENST00000460162 LUMP51884 338 aaPredicted RBP17.78■□□□□ 0.44
PTPN4-207ENST00000460162 QRFPP83859 136 aa17.78■□□□□ 0.44
PTPN4-207ENST00000460162 C5orf64Q2M2E5 130 aa17.78■□□□□ 0.44
PTPN4-207ENST00000460162 NPBQ8NG41 125 aa17.78■□□□□ 0.44
PTPN4-207ENST00000460162 UFD1Q92890 307 aa17.78■□□□□ 0.44
PTPN4-207ENST00000460162 KCNK15Q9H427 330 aa17.78■□□□□ 0.44
PTPN4-207ENST00000460162 CHMP1AQ9HD42 196 aaPredicted RBP17.78■□□□□ 0.44
PTPN4-207ENST00000460162 KIAA1456Q9P272 454 aa17.78■□□□□ 0.44
PTPN4-207ENST00000460162 IGHV7-81A0A0B4J1V7 117 aa17.77■□□□□ 0.44
PTPN4-207ENST00000460162 CNTFRP26992 372 aa17.77■□□□□ 0.44
PTPN4-207ENST00000460162 IRF3Q14653 427 aa17.77■□□□□ 0.44
PTPN4-207ENST00000460162 UBE2E2Q96LR5 201 aa17.77■□□□□ 0.44
PTPN4-207ENST00000460162 ANKRD60Q9BZ19 345 aa17.77■□□□□ 0.44
PTPN4-207ENST00000460162 RIMS4Q9H426 269 aaPredicted RBP17.77■□□□□ 0.44
PTPN4-207ENST00000460162 PARP11Q9NR21 331 aa17.77■□□□□ 0.44
PTPN4-207ENST00000460162 RAB29O14966 203 aa17.76■□□□□ 0.43
PTPN4-207ENST00000460162 ST8SIA5O15466 376 aa17.76■□□□□ 0.43
PTPN4-207ENST00000460162 BLVRBP30043 206 aaPredicted RBP17.76■□□□□ 0.43
PTPN4-207ENST00000460162 LIPKQ5VXJ0 399 aa17.76■□□□□ 0.43
PTPN4-207ENST00000460162 TMEM65Q6PI78 240 aa17.76■□□□□ 0.43
PTPN4-207ENST00000460162 RITA1Q96K30 269 aa17.76■□□□□ 0.43
PTPN4-207ENST00000460162 URM1Q9BTM9 101 aaKnown RBP17.76■□□□□ 0.43
PTPN4-207ENST00000460162 PLEKHJ1Q9NW61 149 aa17.76■□□□□ 0.43
PTPN4-207ENST00000460162 SLC23A1Q9UHI7 598 aa17.76■□□□□ 0.43
PTPN4-207ENST00000460162 A0A0A6YYD4 124 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 TRBV6-6A0A0A6YYG2 114 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 TRAV41A0A0B4J266 112 aa17.75■□□□□ 0.43
PTPN4-207ENST00000460162 OR5H14A6NHG9 310 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms