RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 RAB11AP62491 216 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 SLC25A26Q70HW3 274 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 THNSL2Q86YJ6 484 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 TMEM183AQ8IXX5 376 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 NAXEQ8NCW5 288 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 PACRGQ96M98 296 aaPredicted RBP7.26□□□□□ -1.25
VPS50-208ENST00000458707 PYGO2Q9BRQ0 406 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 DDA1Q9BW61 102 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 C1QTNF5Q9BXJ0 243 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 PRDM14Q9GZV8 571 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 WDR54Q9H977 334 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 CCL28Q9NRJ3 127 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 RPRMQ9NS64 109 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 GNG13Q9P2W3 67 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 ATP23Q9Y6H3 246 aa7.26□□□□□ -1.25
VPS50-208ENST00000458707 TRBV6-6A0A0A6YYG2 114 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 IGKV1-6A0A0C4DH72 117 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 A0A0G2JRQ6 117 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 XKRY2A2RUG3 117 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 DVL1O14640 695 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 PGLYRP1O75594 196 aaPredicted RBP7.25□□□□□ -1.25
VPS50-208ENST00000458707 B4GALT1P15291 398 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 F2RP25116 425 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 IL2RGP31785 369 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 B3GALT5-AS1P59052 145 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 SERF2P84101 59 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 HTD2P86397 168 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 SLC10A1Q14973 349 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 JOSD1Q15040 202 aaPredicted RBP7.25□□□□□ -1.25
VPS50-208ENST00000458707 ZNF726P1Q15940 193 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 MPV17LQ2QL34 196 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 PDZD11Q5EBL8 140 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 COA6Q5JTJ3 125 aaKnown RBP7.25□□□□□ -1.25
VPS50-208ENST00000458707 COLCA1Q6ZS62 124 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 TIPARPQ7Z3E1 657 aaKnown RBP7.25□□□□□ -1.25
VPS50-208ENST00000458707 MRGPRGQ86SM5 289 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 DNASE2BQ8WZ79 361 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 IMMP1LQ96LU5 166 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 FOXB1Q99853 325 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 AGMATQ9BSE5 352 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 CSTL1Q9H114 145 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 ZNF665Q9H7R5 613 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 ZFAND3Q9H8U3 227 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 OR14J1Q9UGF5 321 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 CNTRLQ7Z7A1 2325 aa7.25□□□□□ -1.25
VPS50-208ENST00000458707 IGHV1-45A0A0A0MS14 117 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 IGHV5-10-1A0A0J9YXX1 117 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 SERTM2A0A1B0GWG4 89 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 SMCO3A2RU48 225 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 RPLP1P05386 114 aaKnown RBP7.24□□□□□ -1.25
VPS50-208ENST00000458707 CELA2AP08217 269 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 SNRPCP09234 159 aaKnown RBP7.24□□□□□ -1.25
VPS50-208ENST00000458707 MMP7P09237 267 aaPredicted RBP7.24□□□□□ -1.25
VPS50-208ENST00000458707 NBEAP1P0C6P0 100 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 PATE4P0C8F1 98 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 PGA5P0DJD9 388 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 SRFP11831 508 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 BCL3P20749 454 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 FGF7P21781 194 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 ARSJQ5FYB0 599 aaPredicted RBP7.24□□□□□ -1.25
VPS50-208ENST00000458707 WDR25Q64LD2 544 aaPredicted RBP7.24□□□□□ -1.25
VPS50-208ENST00000458707 PCSK4Q6UW60 755 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 C5orf24Q7Z6I8 188 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 CENPVQ7Z7K6 275 aaPredicted RBP7.24□□□□□ -1.25
VPS50-208ENST00000458707 LINC00528Q8N1L1 170 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 ZNF525Q8N782 197 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 FGFBP3Q8TAT2 258 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 WFDC12Q8WWY7 111 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 LSM10Q969L4 123 aaKnown RBP7.24□□□□□ -1.25
VPS50-208ENST00000458707 GPR146Q96CH1 333 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 GPHA2Q96T91 129 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 CABLES2Q9BTV7 478 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 ACTR3CQ9C0K3 210 aaPredicted RBP7.24□□□□□ -1.25
VPS50-208ENST00000458707 SMOC1Q9H4F8 434 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 SRD5A3Q9H8P0 318 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 VAX2Q9UIW0 290 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 KMT2EQ8IZD2 1858 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 A0A1W2PQM1 296 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 NKX6-3A6NJ46 265 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 ZFP92A6NM28 416 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 PFN1P07737 140 aaKnown RBP7.24□□□□□ -1.25
VPS50-208ENST00000458707 STAG3L3P0CL85 134 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 SSR4P51571 173 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 PRRX1P54821 245 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 RPS18P62269 152 aaKnown RBP7.24□□□□□ -1.25
VPS50-208ENST00000458707 NRN1LQ496H8 165 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 LEMD1Q68G75 181 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 ZNF324BQ6AW86 544 aaPredicted RBP7.24□□□□□ -1.25
VPS50-208ENST00000458707 OR8G2PQ6IF36 304 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 ZNF880Q6PDB4 577 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 SSX7Q7RTT5 188 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 AAED1Q7RTV5 226 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 LINC00596Q86U02 117 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 GGNQ86UU5 652 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 ZNF573Q86YE8 665 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 TGIF2LYQ8IUE0 185 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 OR4X1Q8NH49 305 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 SCGB1C1Q8TD33 95 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 KCNE4Q8WWG9 221 aa7.24□□□□□ -1.25
VPS50-208ENST00000458707 NUDT11Q96G61 164 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms