RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 RBMXL1Q96E39 390 aaKnown RBP9□□□□□ -0.97
SCN9A-205ENST00000454569 GINS4Q9BRT9 223 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 REG4Q9BYZ8 158 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 LINC00574Q9H8X3 128 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 NECAP2Q9NVZ3 263 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 SCP2D1Q9UJQ7 156 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 UBE2J1Q9Y385 318 aaPredicted RBP9□□□□□ -0.97
SCN9A-205ENST00000454569 OTOGQ6ZRI0 2925 aa9□□□□□ -0.97
SCN9A-205ENST00000454569 C17orf98A8MV24 154 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 A8MXK9 166 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 ARPC1BO15143 372 aaKnown RBP8.99□□□□□ -0.97
SCN9A-205ENST00000454569 TUSC2O75896 110 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 NDUFB6O95139 128 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 IFNA6P05013 189 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 SLC25A16P16260 332 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 NFYBP25208 207 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 CEACAM6P40199 344 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 ARF6P62330 175 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 BAMBIQ13145 260 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 IDO2Q6ZQW0 420 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 C1orf229Q6ZS94 237 aaPredicted RBP8.99□□□□□ -0.97
SCN9A-205ENST00000454569 MARCH1Q8TCQ1 289 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 GALMQ96C23 342 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 ZNF714Q96N38 554 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 PRRT1Q99946 306 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 FXYD6Q9H0Q3 95 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 OR2S2Q9NQN1 319 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 RDH8Q9NYR8 311 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 TAS2R3Q9NYW6 316 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 IDI2-AS1Q9NZ38 188 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 ALG5Q9Y673 324 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 TLN2Q9Y4G6 2542 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 TRBV23-1A0A0A0MS06 115 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 PEX14O75381 377 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 PI3P19957 117 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 EPHA1P21709 976 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 FPR2P25090 351 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 RAG2P55895 527 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 FXYD4P59646 89 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 TSPAN5P62079 268 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 MORN2Q502X0 79 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 METTL11BQ5VVY1 283 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 PRSS57Q6UWY2 283 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 OR10J5Q8NHC4 309 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 GIMAP1Q8WWP7 306 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 C5orf30Q96GV9 206 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 GPHA2Q96T91 129 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 GFOD1Q9NXC2 390 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 OPN4Q9UHM6 478 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 ITGB1BP2Q9UKP3 347 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 RNF150Q9ULK6 438 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 VSIG4Q9Y279 399 aa8.99□□□□□ -0.97
SCN9A-205ENST00000454569 CREBBPQ92793 2442 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 IGHV2-70DA0A0C4DH43 119 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 SPINT2O43291 252 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 PPYP01298 95 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 IGLV2-14P01704 120 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 LIPFP07098 398 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 IGHV1-8P0DP01 117 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 HTD2P86397 168 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 CT45A1Q5HYN5 189 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 HCP5Q6MZN7 132 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 HEPN1Q6WQI6 88 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 ZNF554Q86TJ5 538 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 ARRDC1Q8N5I2 433 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 ZNF439Q8NDP4 499 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 OR6F1Q8NGZ6 308 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 TERB2Q8NHR7 220 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 CT45A3Q8NHU0 189 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 RAB39BQ96DA2 213 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 FOXC2Q99958 501 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 SUCNR1Q9BXA5 334 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 BEX2Q9BXY8 128 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 TOLLIPQ9H0E2 274 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 BEX1Q9HBH7 125 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 SIRT7Q9NRC8 400 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 SLC2A8Q9NY64 477 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 ONECUT1Q9UBC0 465 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 MGAT4AQ9UM21 535 aa8.98□□□□□ -0.97
SCN9A-205ENST00000454569 HSPA12AO43301 675 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 PRAF2O60831 178 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 PROP1O75360 226 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 ZBTB25P24278 435 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 GNG10P50151 68 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 LINC00205P59089 165 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 LOXL1Q08397 574 aaPredicted RBP8.97□□□□□ -0.97
SCN9A-205ENST00000454569 CBX3Q13185 183 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 KLRD1Q13241 179 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 TRAT1Q6PIZ9 186 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 AKAP14Q86UN6 197 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 TMEM17Q86X19 198 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 ADAD2Q8NCV1 583 aaKnown RBP8.97□□□□□ -0.97
SCN9A-205ENST00000454569 CHAC2Q8WUX2 184 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 TOMM40LQ969M1 308 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 PPP1R14BQ96C90 147 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 C1orf159Q96HA4 380 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 ABHD14BQ96IU4 210 aa8.97□□□□□ -0.97
SCN9A-205ENST00000454569 SLC25A21Q9BQT8 299 aaPredicted RBP8.97□□□□□ -0.97
SCN9A-205ENST00000454569 RTBDNQ9BSG5 229 aaPredicted RBP8.97□□□□□ -0.97
SCN9A-205ENST00000454569 SIRPDQ9H106 197 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms