RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 GUCD1Q96NT3 240 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 SPENQ96T58 3664 aaKnown RBP11.55□□□□□ -0.56
POLR1B-209ENST00000448770 OR5H1A6NKK0 313 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 FAM166BA8MTA8 275 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 GATCO43716 136 aaKnown RBP11.55□□□□□ -0.56
POLR1B-209ENST00000448770 DEFA4P12838 97 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 SELEP16581 610 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 OR13D1Q8NGV5 346 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 GTF3AQ92664 365 aaKnown RBP11.55□□□□□ -0.56
POLR1B-209ENST00000448770 C14orf144Q96I85 54 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 WDR61Q9GZS3 305 aaKnown RBP11.55□□□□□ -0.56
POLR1B-209ENST00000448770 CDH20Q9HBT6 801 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 DNAJC13O75165 2243 aa11.55□□□□□ -0.56
POLR1B-209ENST00000448770 UBE2L5PA0A1B0GUS4 154 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 MAP1LC3B2A6NCE7 125 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 CLDN34H7C241 214 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 SIRPB1O00241 398 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 GALR2O43603 387 aaPredicted RBP11.54□□□□□ -0.56
POLR1B-209ENST00000448770 PDGFBP01127 241 aaPredicted RBP11.54□□□□□ -0.56
POLR1B-209ENST00000448770 SPANXN5Q5MJ07 72 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 ACSM6Q6P461 480 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 HIST1H2BLQ99880 126 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 MAP1LC3BQ9GZQ8 125 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 SMOC1Q9H4F8 434 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 LRFN1Q9P244 771 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 PRSS50Q9UI38 385 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 FAM186AA6NE01 2351 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 GTF3C1Q12789 2109 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 NBEAQ8NFP9 2946 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 B4DEV8 164 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 WDR1O75083 606 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 GZMHP20718 246 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 MAGEA5P43359 124 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 RPS16P62249 146 aaKnown RBP11.54□□□□□ -0.56
POLR1B-209ENST00000448770 OR2M7Q8NG81 312 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 SCGB1C1Q8TD33 95 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 LSM10Q969L4 123 aaKnown RBP11.54□□□□□ -0.56
POLR1B-209ENST00000448770 PSMG3Q9BT73 122 aaPredicted RBP11.54□□□□□ -0.56
POLR1B-209ENST00000448770 OR51I2Q9H344 312 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 PRO1933Q9H354 126 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 KCNS2Q9ULS6 477 aa11.54□□□□□ -0.56
POLR1B-209ENST00000448770 MRPS18CQ9Y3D5 142 aaKnown RBP11.54□□□□□ -0.56
POLR1B-209ENST00000448770 RAMP3O60896 148 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 PTBP3O95758 552 aaKnown RBP11.53□□□□□ -0.56
POLR1B-209ENST00000448770 MT-CO3P00414 261 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 CLN3Q13286 438 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 TRA2AQ13595 282 aaKnown RBP eCLIP11.53□□□□□ -0.56
POLR1B-209ENST00000448770 RTP5Q14D33 572 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 NECAP1Q8NC96 275 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 OR4X1Q8NH49 305 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 ELOVL1Q9BW60 279 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 TRBV24-1A0A075B6N3 115 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 DEGS1O15121 323 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 WNT2P09544 360 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 COX5BP10606 129 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 CEBPDP49716 269 aaPredicted RBP11.53□□□□□ -0.56
POLR1B-209ENST00000448770 CLEC12BQ2HXU8 276 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 TMEM41BQ5BJD5 291 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 OR8G2PQ6IF36 304 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 LILRB2Q8N423 598 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 DRAM1Q8N682 238 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 RIMS4Q9H426 269 aaPredicted RBP11.53□□□□□ -0.56
POLR1B-209ENST00000448770 TMEM242Q9NWH2 141 aa11.53□□□□□ -0.56
POLR1B-209ENST00000448770 ELOA3CA0A087WX78 387 aaPredicted RBP11.52□□□□□ -0.56
POLR1B-209ENST00000448770 NPIPB11E5RHQ5 1161 aa11.52□□□□□ -0.56
POLR1B-209ENST00000448770 OR2H2O95918 312 aa11.52□□□□□ -0.56
POLR1B-209ENST00000448770 SERPINA7P05543 415 aa11.52□□□□□ -0.56
POLR1B-209ENST00000448770 GNG3P63215 75 aa11.52□□□□□ -0.56
POLR1B-209ENST00000448770 PNRC1Q12796 327 aaPredicted RBP11.52□□□□□ -0.56
POLR1B-209ENST00000448770 PRSS8Q16651 343 aa11.52□□□□□ -0.56
POLR1B-209ENST00000448770 ALKBH6Q3KRA9 238 aa11.52□□□□□ -0.56
POLR1B-209ENST00000448770 C16orf82Q7Z2V1 217 aa11.52□□□□□ -0.56
POLR1B-209ENST00000448770 TAF15Q92804 592 aaKnown RBP eCLIP11.52□□□□□ -0.56
POLR1B-209ENST00000448770 THOC3Q96J01 351 aaKnown RBP11.52□□□□□ -0.56
POLR1B-209ENST00000448770 HIST1H2AAQ96QV6 131 aa11.52□□□□□ -0.56
POLR1B-209ENST00000448770 SLC25A22Q9H936 323 aa11.52□□□□□ -0.56
POLR1B-209ENST00000448770 VAX2Q9UIW0 290 aa11.52□□□□□ -0.56
POLR1B-209ENST00000448770 AHCTF1Q8WYP5 2266 aa11.52□□□□□ -0.56
POLR1B-209ENST00000448770 IL18BPO95998 194 aa11.52□□□□□ -0.57
POLR1B-209ENST00000448770 PFN1P07737 140 aaKnown RBP11.52□□□□□ -0.57
POLR1B-209ENST00000448770 ERVS71-1P61550 626 aa11.52□□□□□ -0.57
POLR1B-209ENST00000448770 RPL30P62888 115 aaKnown RBP11.52□□□□□ -0.57
POLR1B-209ENST00000448770 ADIRFQ15847 76 aa11.52□□□□□ -0.57
POLR1B-209ENST00000448770 ZNF497Q6ZNH5 498 aa11.52□□□□□ -0.57
POLR1B-209ENST00000448770 PACRGQ96M98 296 aaPredicted RBP11.52□□□□□ -0.57
POLR1B-209ENST00000448770 OPA3Q9H6K4 179 aa11.52□□□□□ -0.57
POLR1B-209ENST00000448770 TMEM9BQ9NQ34 198 aa11.52□□□□□ -0.57
POLR1B-209ENST00000448770 PLA2G3Q9NZ20 509 aa11.52□□□□□ -0.57
POLR1B-209ENST00000448770 ZNF737O75373 536 aa11.51□□□□□ -0.57
POLR1B-209ENST00000448770 TFF1P04155 84 aa11.51□□□□□ -0.57
POLR1B-209ENST00000448770 CELA3BP08861 270 aa11.51□□□□□ -0.57
POLR1B-209ENST00000448770 BRWD1-AS2P59051 145 aa11.51□□□□□ -0.57
POLR1B-209ENST00000448770 COL10A1Q03692 680 aa11.51□□□□□ -0.57
POLR1B-209ENST00000448770 SLC38A11Q08AI6 406 aa11.51□□□□□ -0.57
POLR1B-209ENST00000448770 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.51□□□□□ -0.57
POLR1B-209ENST00000448770 MRGPRGQ86SM5 289 aa11.51□□□□□ -0.57
POLR1B-209ENST00000448770 LINC00596Q86U02 117 aa11.51□□□□□ -0.57
POLR1B-209ENST00000448770 ZNF573Q86YE8 665 aa11.51□□□□□ -0.57
POLR1B-209ENST00000448770 UFSP2Q9NUQ7 469 aa11.51□□□□□ -0.57
POLR1B-209ENST00000448770 ANKRD30BLA7E2S9 258 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms