RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 A0A1W2PRS3 328 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 TCRBV3S1A0A5B6 114 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 DHRS12A0PJE2 317 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 OR51F1A6NGY5 319 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 MSGN1A6NI15 193 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 FAM183AA6NL82 134 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 COLCA2A8K830 154 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 A8MT66 165 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 ZNF724A8MTY0 619 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 F6UB75 175 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 LINC01619G3V211 115 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 H7BYZ3 331 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 J3QRK9 145 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 J3QT63 122 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 RFXAPO00287 272 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 PIRO00625 290 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 RRHO14718 337 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 NPFFO15130 113 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 BCL2L11O43521 198 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 OR2T1O43869 369 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 TYROBPO43914 113 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 PSPNO60542 156 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 NDUFS7O75251 213 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 CDK2AP2O75956 126 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 WISP2O76076 250 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 JTBO76095 146 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 MPC2O95563 127 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 NTN1O95631 604 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 CA2P00918 260 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 HLA-DRB1P01911 266 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 ATP5G1P05496 136 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 CD55P08174 381 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 ELANEP08246 267 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 H2AFZP0C0S5 128 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 PGA4P0DJD7 388 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 PGA3P0DJD8 388 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 P0DMU3 169 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 FAM231AP0DMU4 169 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 FAM231CP0DMU5 169 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 OR12D1P0DN82 309 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 LAMP1P11279 417 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 SPNP16150 400 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 CXCL2P19875 107 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 GPD1P21695 349 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 NFYBP25208 207 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 CD38P28907 300 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 PPP1CCP36873 323 aaKnown RBP2.28□□□□□ -2.04
UBBP3-201ENST00000445497 RBMXP38159 391 aaKnown RBP2.28□□□□□ -2.04
UBBP3-201ENST00000445497 RARRES1P49788 294 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 NUDT2P50583 147 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 APOC4P55056 127 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 SRPXP78539 464 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 HLA-DRB3P79483 266 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 RBMS2Q15434 407 aaKnown RBP2.28□□□□□ -2.04
UBBP3-201ENST00000445497 C12orf74Q32Q52 190 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 Q499Y3 187 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 Q5BKY6 102 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 FAM74A1Q5RGS3 127 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 C10orf91Q5T1B1 145 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 LYRM7Q5U5X0 104 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 AMMECR1LQ6DCA0 310 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 FAAP20Q6NZ36 180 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 ZNF880Q6PDB4 577 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 AMTNQ6UX39 209 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 ZNF705AQ6ZN79 300 aaPredicted RBP2.28□□□□□ -2.04
UBBP3-201ENST00000445497 Q6ZRU5 148 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 NOTCH2NLQ7Z3S9 236 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 TMEM179BQ7Z7N9 219 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 LRRTM1Q86UE6 522 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 SLC22A18ASQ8N1D0 253 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 SLC25A45Q8N413 288 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 FTMTQ8N4E7 242 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 LINC00482Q8N8I6 264 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 ZFP62Q8NB50 900 aaPredicted RBP2.28□□□□□ -2.04
UBBP3-201ENST00000445497 OR2T33Q8NG76 320 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 OR5AP2Q8NGF4 316 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 OR10D4PQ8NGN7 298 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 C11orf45Q8TAV5 145 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 APOBEC4Q8WW27 367 aaKnown RBP2.28□□□□□ -2.04
UBBP3-201ENST00000445497 RTN4IP1Q8WWV3 396 aaPredicted RBP2.28□□□□□ -2.04
UBBP3-201ENST00000445497 COPS9Q8WXC6 57 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 SARAFQ96BY9 339 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 WBP1Q96G27 269 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 C18orf12Q96KH6 178 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 SIGLEC10Q96LC7 697 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 METTL26Q96S19 204 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 NMNAT3Q96T66 252 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 SNRNP25Q9BV90 132 aaKnown RBP2.28□□□□□ -2.04
UBBP3-201ENST00000445497 TMEM147Q9BVK8 224 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 SSBP3Q9BWW4 388 aaPredicted RBP2.28□□□□□ -2.04
UBBP3-201ENST00000445497 GGTLC1Q9BX51 225 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 MRPL20Q9BYC9 149 aaKnown RBP2.28□□□□□ -2.04
UBBP3-201ENST00000445497 SPRY4Q9C004 299 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 PRO1933Q9H354 126 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 TCEAL2Q9H3H9 227 aaPredicted RBP2.28□□□□□ -2.04
UBBP3-201ENST00000445497 DUSP21Q9H596 190 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 JPT2Q9H910 190 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 EXOSC3Q9NQT5 275 aaKnown RBP2.28□□□□□ -2.04
UBBP3-201ENST00000445497 KCNIP2Q9NS61 270 aa2.28□□□□□ -2.04
UBBP3-201ENST00000445497 TVP23BQ9NYZ1 205 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms