RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 FAM90A15PP0C7V4 464 aa8.99□□□□□ -0.97
CALD1-210ENST00000443197 FAM90A13PP0C7W8 464 aa8.99□□□□□ -0.97
CALD1-210ENST00000443197 FAM90A14PP0C7W9 464 aa8.99□□□□□ -0.97
CALD1-210ENST00000443197 FAM90A24PP0C7X0 464 aa8.99□□□□□ -0.97
CALD1-210ENST00000443197 IGKV1-13P0DP09 117 aa8.99□□□□□ -0.97
CALD1-210ENST00000443197 RUNX1Q01196 453 aa8.99□□□□□ -0.97
CALD1-210ENST00000443197 EWSR1Q01844 656 aaKnown RBP eCLIP8.99□□□□□ -0.97
CALD1-210ENST00000443197 LINC00596Q86U02 117 aa8.99□□□□□ -0.97
CALD1-210ENST00000443197 OR5D13Q8NGL4 314 aa8.99□□□□□ -0.97
CALD1-210ENST00000443197 PLPPR1Q8TBJ4 325 aa8.99□□□□□ -0.97
CALD1-210ENST00000443197 FAM57AQ8TBR7 257 aa8.99□□□□□ -0.97
CALD1-210ENST00000443197 C17orf50Q8WW18 174 aa8.99□□□□□ -0.97
CALD1-210ENST00000443197 LHX4Q969G2 390 aa8.99□□□□□ -0.97
CALD1-210ENST00000443197 GNPNAT1Q96EK6 184 aaPredicted RBP8.99□□□□□ -0.97
CALD1-210ENST00000443197 CRIM1Q9NZV1 1036 aa8.99□□□□□ -0.97
CALD1-210ENST00000443197 LRP4O75096 1905 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 B3GALNT1O75752 331 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 UBE2KP61086 200 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 GLRX5Q86SX6 157 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 C1orf147Q96MC9 270 aaPredicted RBP8.98□□□□□ -0.97
CALD1-210ENST00000443197 SPRY4Q9C004 299 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 COMMD5Q9GZQ3 224 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 COL6A3P12111 3177 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 TRAV38-1A0A0B4J264 116 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 IGHV1-18A0A0C4DH31 117 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 hADV38S2A0JD32 116 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 RPL31P62899 125 aaKnown RBP8.98□□□□□ -0.97
CALD1-210ENST00000443197 RTL8BQ17RB0 113 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 SNRNP40Q96DI7 357 aaKnown RBP8.98□□□□□ -0.97
CALD1-210ENST00000443197 MYOZ1Q9NP98 299 aaPredicted RBP8.98□□□□□ -0.97
CALD1-210ENST00000443197 TRAV24A0A0B4J272 114 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 K7EM74 188 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 CDS2O95674 445 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 KITLGP21583 273 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 LGALS4P56470 323 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 TMEM187Q14656 261 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 FAM122CQ6P4D5 195 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 CLN8Q9UBY8 286 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 REV3LO60673 3130 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 ODAMA1E959 279 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 CD40P25942 277 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 GLRXP35754 106 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 ID4P47928 161 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 STUMQ69YW2 141 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 R3HDM4Q96D70 268 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 DHRS9Q9BPW9 319 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 NKX6-2Q9C056 277 aaPredicted RBP8.98□□□□□ -0.97
CALD1-210ENST00000443197 ZNF665Q9H7R5 613 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 C19orf12Q9NSK7 152 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 CLCF1Q9UBD9 225 aa8.98□□□□□ -0.97
CALD1-210ENST00000443197 hCG_1809904A0A1W2PP81 198 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 A0A1W2PPE2 198 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 A0A1W2PR64 198 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 A0A1W2PRV1 198 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 WIPF3A6NGB9 483 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 MGST3O14880 152 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 CNIH1O95406 144 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 HOXD11P31277 338 aaPredicted RBP8.97□□□□□ -0.97
CALD1-210ENST00000443197 MOB3BQ86TA1 216 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 RAB40CQ96S21 281 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 CISD1Q9NZ45 108 aaKnown RBP8.97□□□□□ -0.97
CALD1-210ENST00000443197 C12orf77C9JDV5 145 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 RNASEK-C17orf49H0YIS7 233 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 HBE1P02100 147 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 FGF7P21781 194 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 FGF8P55075 233 aaPredicted RBP8.97□□□□□ -0.97
CALD1-210ENST00000443197 SLC38A11Q08AI6 406 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 TUSC1Q2TAM9 212 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 MS4A5Q9H3V2 200 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 IL36GQ9NZH8 169 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 ONECUT1Q9UBC0 465 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 LAMP3Q9UQV4 416 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 NPTNQ9Y639 398 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 UMAD1C9J7I0 102 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 C17orf112F2Z3M2 114 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 ATXN7O15265 892 aaPredicted RBP8.97□□□□□ -0.97
CALD1-210ENST00000443197 DEDDO75618 318 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 APELAP0DMC3 54 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 UCNP55089 124 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 BSPH1Q075Z2 132 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 ZNF345Q14585 488 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 PRR30Q53SZ7 412 aaPredicted RBP8.97□□□□□ -0.97
CALD1-210ENST00000443197 VKORC1L1Q8N0U8 176 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 TRAF4Q9BUZ4 470 aaPredicted RBP8.97□□□□□ -0.97
CALD1-210ENST00000443197 COL25A1Q9BXS0 654 aaPredicted RBP8.97□□□□□ -0.97
CALD1-210ENST00000443197 POMT1Q9Y6A1 747 aa8.97□□□□□ -0.97
CALD1-210ENST00000443197 PTBP3O95758 552 aaKnown RBP8.96□□□□□ -0.97
CALD1-210ENST00000443197 F12P00748 615 aaPredicted RBP8.96□□□□□ -0.97
CALD1-210ENST00000443197 P2RY1P47900 373 aa8.96□□□□□ -0.97
CALD1-210ENST00000443197 NUBP1P53384 320 aa8.96□□□□□ -0.97
CALD1-210ENST00000443197 PJVKQ0ZLH3 352 aa8.96□□□□□ -0.97
CALD1-210ENST00000443197 TMEM42Q69YG0 159 aa8.96□□□□□ -0.97
CALD1-210ENST00000443197 ACP7Q6ZNF0 438 aa8.96□□□□□ -0.97
CALD1-210ENST00000443197 FGFRL1Q8N441 504 aa8.96□□□□□ -0.97
CALD1-210ENST00000443197 MRPL30Q8TCC3 161 aaKnown RBP8.96□□□□□ -0.97
CALD1-210ENST00000443197 GTF3AQ92664 365 aaKnown RBP8.96□□□□□ -0.97
CALD1-210ENST00000443197 GPR146Q96CH1 333 aa8.96□□□□□ -0.97
CALD1-210ENST00000443197 PHYHIPLQ96FC7 376 aa8.96□□□□□ -0.97
CALD1-210ENST00000443197 SLC25A10Q9UBX3 287 aaPredicted RBP8.96□□□□□ -0.97
CALD1-210ENST00000443197 PPIAL4EA0A075B759 164 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms