RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 SLC2A9Q9NRM0 540 aa4.01□□□□□ -1.77
EDEM3-203ENST00000439962 UQCC1Q9NVA1 299 aa4.01□□□□□ -1.77
EDEM3-203ENST00000439962 OR5AC2Q9NZP5 309 aa4.01□□□□□ -1.77
EDEM3-203ENST00000439962 ST3GAL6Q9Y274 331 aa4.01□□□□□ -1.77
EDEM3-203ENST00000439962 TMA7Q9Y2S6 64 aaKnown RBP4.01□□□□□ -1.77
EDEM3-203ENST00000439962 AMDHD2Q9Y303 409 aa4.01□□□□□ -1.77
EDEM3-203ENST00000439962 IGHV4-30-2A0A087WSY4 118 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 IGHV2OR16-5A0A0B4J2B6 119 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 TMEM210A6NLX4 147 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 TRDCB7Z8K6 153 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 H0Y980 276 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 GPR31O00270 319 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 NDUFA2O43678 99 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 PITX3O75364 302 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 ADAP1O75689 374 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 PPYP01298 95 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 IGHV4-39P01824 125 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 TK1P04183 234 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 DANCRP0C864 163 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 GABRR1P24046 479 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 FCGR2CP31995 323 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 HGFACQ04756 655 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 BTN1A1Q13410 526 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 GNMTQ14749 295 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 RNF212Q495C1 297 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 LRRC37A5PQ49AS3 106 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 AVPI1Q5T686 147 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 BATF2Q8N1L9 274 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 ZNF611Q8N823 705 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 BOLLQ8N9W6 283 aaKnown RBP4□□□□□ -1.77
EDEM3-203ENST00000439962 ZBTB34Q8NCN2 500 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 OR1J1Q8NGS3 322 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 OR51F2Q8NH61 342 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 HIST1H2AAQ96QV6 131 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 NRIP2Q9BQI9 281 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 PBDC1Q9BVG4 233 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 OR2J1Q9GZK6 312 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 TOLLIPQ9H0E2 274 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 ELL3Q9HB65 397 aaPredicted RBP4□□□□□ -1.77
EDEM3-203ENST00000439962 IGKV1-12A0A0C4DH73 117 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 C3orf85A0A1B0GTC6 90 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 FAM230AA0A1W2PPH8 454 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 ZNF705EA8MWA4 302 aaPredicted RBP4□□□□□ -1.77
EDEM3-203ENST00000439962 INAFM1C9JVW0 142 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 MPPED1O15442 326 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 IGKV1D-12P01611 117 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 APOC3P02656 99 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 OR8U8P0C7N1 319 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 LOXP28300 417 aaPredicted RBP4□□□□□ -1.77
EDEM3-203ENST00000439962 TAS2R30P59541 319 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 PAX5Q02548 391 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 PRDX4Q13162 271 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 PMS2P11Q13670 270 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 SWI5Q1ZZU3 235 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 UNQ6126/PRO20091Q6UXV3 157 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 MRPL21Q7Z2W9 205 aaKnown RBP4□□□□□ -1.77
EDEM3-203ENST00000439962 RNF144BQ7Z419 303 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 C15orf54Q8N8G6 183 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 C1orf162Q8NEQ5 155 aaPredicted RBP4□□□□□ -1.77
EDEM3-203ENST00000439962 C22orf15Q8WYQ4 148 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 CCL17Q92583 94 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 LSM10Q969L4 123 aaKnown RBP4□□□□□ -1.77
EDEM3-203ENST00000439962 GNPNAT1Q96EK6 184 aaPredicted RBP4□□□□□ -1.77
EDEM3-203ENST00000439962 NARS2Q96I59 477 aaKnown RBP4□□□□□ -1.77
EDEM3-203ENST00000439962 POM121L2Q96KW2 1035 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 NKX3-1Q99801 234 aaPredicted RBP4□□□□□ -1.77
EDEM3-203ENST00000439962 MICU1Q9BPX6 476 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 FAAP24Q9BTP7 215 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 MRPL37Q9BZE1 423 aaKnown RBP4□□□□□ -1.77
EDEM3-203ENST00000439962 EGLN1Q9GZT9 426 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 CACFD1Q9UGQ2 172 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 RNF150Q9ULK6 438 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 PRELID3BQ9Y3B1 194 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 LOC100509620A0A075B734 347 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 C5orf63A6NC05 138 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 ANKRD30BLA7E2S9 258 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 FAM90A26D6RGX4 464 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 TRAPPC2LH3BP13 241 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 SDCBPO00560 298 aaPredicted RBP4□□□□□ -1.77
EDEM3-203ENST00000439962 GEMIN2O14893 280 aaKnown RBP4□□□□□ -1.77
EDEM3-203ENST00000439962 HSPA12AO43301 675 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 SOX15O60248 233 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 VDAC1P21796 283 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 MAS1LP35410 378 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 ARHGDIBP52566 201 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 TMEM33P57088 247 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 GNG3P63215 75 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 ADIPOQQ15848 244 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 TAF9Q16594 264 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 SPIN3Q5JUX0 258 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 PXDC1Q5TGL8 231 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 CLEC9AQ6UXN8 241 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 FBXW12Q6X9E4 464 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 CMTM1Q8IZ96 169 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 DMBX1Q8NFW5 382 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 OR10G4Q8NGN3 311 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 OR10Z1Q8NGY1 313 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 OR2AE1Q8NHA4 323 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 GLYATL2Q8WU03 294 aa4□□□□□ -1.77
EDEM3-203ENST00000439962 TMED6Q8WW62 240 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms