RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 PKIBQ9C010 78 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 G3V3Q6 166 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 C1QCP02747 245 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 WNT5AP41221 380 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 FUT5Q11128 374 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 PSG5Q15238 335 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 C5orf17Q8NAS9 161 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 ZNRF1Q8ND25 227 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 PRSS33Q8NF86 280 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 CXorf58Q96LI9 332 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 LHFPL6Q9Y693 200 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 TRAV8-7A0A075B6U6 113 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 RAB5CP51148 216 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 RAB32Q13637 225 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 FXYD3Q14802 87 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 BAP18Q8IXM2 172 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 OR2C3Q8N628 320 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 EEF1AKMT3Q96AZ1 226 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 SPRR3Q9UBC9 169 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 IGKV3D-11A0A0A0MRZ8 115 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 RPL8P62917 257 aaKnown RBP10.38□□□□□ -0.75
NEK1-201ENST00000439128 NPFFR1Q9GZQ6 430 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 ZNF729A6NN14 1252 aaPredicted RBP10.38□□□□□ -0.75
NEK1-201ENST00000439128 MUC1P15941 1255 aaPredicted RBP10.38□□□□□ -0.75
NEK1-201ENST00000439128 CYB5R2Q6BCY4 276 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 ST6GALNAC3Q8NDV1 305 aa10.38□□□□□ -0.75
NEK1-201ENST00000439128 BMPR1BO00238 502 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 SPINK4O60575 86 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 DEFB121Q5J5C9 76 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 KCNE5Q9UJ90 142 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 GLIPR1P48060 266 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 DYNLT3P51808 116 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 KLF9Q13886 244 aaPredicted RBP10.37□□□□□ -0.75
NEK1-201ENST00000439128 BAK1Q16611 211 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 ANKRD55Q3KP44 614 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 A0A1B0GU03 582 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 MAP1LC3B2A6NCE7 125 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 ERVH48-1M5A8F1 160 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 RAMP1O60894 148 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 SCO1O75880 301 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 NDUFB6O95139 128 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 CPN1P15169 458 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 MFAP4P55083 255 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 DHRS2Q13268 280 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 MAP1LC3BQ9GZQ8 125 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 ST6GALNAC2Q9UJ37 374 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 C17orf100A8MU93 164 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 LYNX1G3V0Z9 82 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 LYNX1P0DP58 116 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 TMEM186Q96B77 213 aa10.37□□□□□ -0.75
NEK1-201ENST00000439128 WISP3O95389 354 aaPredicted RBP10.36□□□□□ -0.75
NEK1-201ENST00000439128 FAM166AQ6J272 317 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 COLCA1Q6ZS62 124 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 NHLRC2Q8NBF2 726 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 GATCO43716 136 aaKnown RBP10.36□□□□□ -0.75
NEK1-201ENST00000439128 OR2C1O95371 312 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 LHX2P50458 406 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 FGF8P55075 233 aaPredicted RBP10.36□□□□□ -0.75
NEK1-201ENST00000439128 CLDN18P56856 261 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 SSX1Q16384 188 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 C11orf87Q6NUJ2 197 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 SEZ6L2Q6UXD5 910 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 SLC35E3Q7Z769 313 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 WDFY1Q8IWB7 410 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 STPG3Q8N7X2 389 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 ZNF426Q9BUY5 554 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 SLC2A9Q9NRM0 540 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 TMEM167BQ9NRX6 74 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 DEPPQ9NTK1 212 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 OR2T8A6NH00 312 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 CEACAM18A8MTB9 384 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 TRBV5-3A0A0A0MS03 114 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 TXNDC12O95881 172 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 REG1AP05451 166 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 ZNF645Q8N7E2 425 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 DLL3Q9NYJ7 618 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 LOC102723971A0A1B0GUV8 181 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 NPIPB11E5RHQ5 1161 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 CRXO43186 299 aaPredicted RBP10.36□□□□□ -0.75
NEK1-201ENST00000439128 CELA3BP08861 270 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 IFI6P09912 130 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 IGSF11Q5DX21 431 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 XAF1Q6GPH4 301 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 BOLA1Q9Y3E2 137 aa10.36□□□□□ -0.75
NEK1-201ENST00000439128 LOC102723996A0A087X1L8 192 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 IGLV1-36A0A0B4J1U3 117 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 MED19A0JLT2 244 aaPredicted RBP10.35□□□□□ -0.75
NEK1-201ENST00000439128 UBE2L6O14933 153 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 HYPMO75409 117 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 FCGR3AP08637 254 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 DNM1P46Q6ZS02 220 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 RELL2Q8NC24 303 aaPredicted RBP10.35□□□□□ -0.75
NEK1-201ENST00000439128 SLC24A4Q8NFF2 622 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 SRRQ9GZT4 340 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 DPM3Q9P2X0 92 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 A0A0G2JMZ2 1700 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 PINLYPA6NC86 204 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 LRRC37A2A6NM11 1700 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 IGKV1D-33P01593 117 aa10.35□□□□□ -0.75
NEK1-201ENST00000439128 IGKV1-33P01594 117 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms