RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 ZNF256Q9Y2P7 627 aaPredicted RBP13.06□□□□□ -0.32
TSC2-206ENST00000439117 CA11O75493 328 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 AGAP20933 346 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 PERPQ96FX8 193 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 PARLQ9H300 379 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 DNAJC4Q9NNZ3 241 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 AP5S1Q9NUS5 200 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 PEF1Q9UBV8 284 aaKnown RBP13.06□□□□□ -0.32
TSC2-206ENST00000439117 KCNMB2Q9Y691 235 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 KLF7O75840 302 aaPredicted RBP13.06□□□□□ -0.32
TSC2-206ENST00000439117 CD74P04233 296 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 FOLR2P14207 255 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 MNX1P50219 401 aaPredicted RBP13.06□□□□□ -0.32
TSC2-206ENST00000439117 SLC35E4Q6ICL7 350 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 ERASQ7Z444 233 aa13.06□□□□□ -0.32
TSC2-206ENST00000439117 MRPL18Q9H0U6 180 aaKnown RBP13.06□□□□□ -0.32
TSC2-206ENST00000439117 MRPS18BQ9Y676 258 aaKnown RBP13.06□□□□□ -0.32
TSC2-206ENST00000439117 LTBP1Q14766 1721 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 IGKV1-8A0A0C4DH67 115 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 A8MWL6 223 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 PPP1CCP36873 323 aaKnown RBP13.05□□□□□ -0.32
TSC2-206ENST00000439117 ZFP36L2P47974 494 aaKnown RBP13.05□□□□□ -0.32
TSC2-206ENST00000439117 NMUP48645 174 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 CTAG1AP78358 180 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 GAB4Q2WGN9 574 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 ZNF260Q3ZCT1 412 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 ZAR1Q86SH2 424 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 DOLPP1Q86YN1 238 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 OR10S1Q8NGN2 331 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 LEPROTL1O95214 131 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 LIMS1P48059 325 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 SPATA46Q5T0L3 261 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 RGPD3A6NKT7 1758 aaPredicted RBP13.05□□□□□ -0.32
TSC2-206ENST00000439117 MPDU1O75352 247 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 NDUFB4O95168 129 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 ORM1P02763 201 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 TEPPQ6URK8 271 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 VSTM2AQ8TAG5 236 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 APOBEC4Q8WW27 367 aaKnown RBP13.05□□□□□ -0.32
TSC2-206ENST00000439117 ZDHHC8Q9ULC8 765 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 NTN1O95631 604 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 GNG10P50151 68 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 SLC25A45Q8N413 288 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 DNASE2BQ8WZ79 361 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 PMCHL2Q9BQD1 86 aa13.05□□□□□ -0.32
TSC2-206ENST00000439117 TRBV9A0A0B4J1U6 114 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 ATRAIDQ6UW56 229 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 OR13G1Q8NGZ3 307 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 MYOZ3Q8TDC0 251 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 TM4SF19Q96DZ7 209 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 MISP3Q96FF7 219 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 LOC285556D6RIA3 1793 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 HIST1H1BP16401 226 aaKnown RBP13.04□□□□□ -0.32
TSC2-206ENST00000439117 ORM2P19652 201 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 UQCRFS1P47985 274 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 CHST5Q9GZS9 411 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 DLX1P56177 255 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 MYOZ1Q9NP98 299 aaPredicted RBP13.04□□□□□ -0.32
TSC2-206ENST00000439117 PCM1Q15154 2024 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 SOX8P57073 446 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 C1QL3Q5VWW1 255 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 OR1L1Q8NH94 360 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 PLPPR2Q96GM1 343 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 PILRAQ9UKJ1 303 aa13.04□□□□□ -0.32
TSC2-206ENST00000439117 BRCA1P38398 1863 aaKnown RBP13.03□□□□□ -0.32
TSC2-206ENST00000439117 A0A1W2PR80 420 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 CA6P23280 308 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 KIR3DL2P43630 455 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 EFNB1P98172 346 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 HIKESHIQ53FT3 197 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 PRDM6Q9NQX0 595 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 MGAT2Q10469 447 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 C1orf100Q5SVJ3 147 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 C9orf40Q8IXQ3 194 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 SARGQ9BW04 601 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.03□□□□□ -0.32
TSC2-206ENST00000439117 DEFB108AA8MXU0 73 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 CEBPDP49716 269 aaPredicted RBP13.03□□□□□ -0.32
TSC2-206ENST00000439117 TTC32Q5I0X7 151 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 SAPCD1Q5SSQ6 148 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 OR8G5Q8NG78 346 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 ZNF71Q9NQZ8 489 aaPredicted RBP13.03□□□□□ -0.32
TSC2-206ENST00000439117 DHRS7CA6NNS2 312 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 HLA-DRB1P01911 266 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 DCAF10Q5QP82 559 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 STPG1Q5TH74 334 aa13.03□□□□□ -0.32
TSC2-206ENST00000439117 LIPT2A6NK58 231 aa13.02□□□□□ -0.32
TSC2-206ENST00000439117 CCL3P10147 92 aa13.02□□□□□ -0.32
TSC2-206ENST00000439117 ZP1P60852 638 aa13.02□□□□□ -0.32
TSC2-206ENST00000439117 UNQ9370/PRO34162Q6UXP9 181 aa13.02□□□□□ -0.32
TSC2-206ENST00000439117 OR2M3Q8NG83 312 aa13.02□□□□□ -0.32
TSC2-206ENST00000439117 RARRES2Q99969 163 aa13.02□□□□□ -0.32
TSC2-206ENST00000439117 PILRBQ9UKJ0 227 aa13.02□□□□□ -0.32
TSC2-206ENST00000439117 SCN3AQ9NY46 2000 aa13.02□□□□□ -0.32
TSC2-206ENST00000439117 NIT1Q86X76 327 aa13.02□□□□□ -0.32
TSC2-206ENST00000439117 OR8I2Q8N0Y5 310 aa13.02□□□□□ -0.32
TSC2-206ENST00000439117 TMEM250H0YL14 139 aa13.02□□□□□ -0.33
TSC2-206ENST00000439117 RPL36A-HNRNPH2H7BZ11 118 aa13.02□□□□□ -0.33
TSC2-206ENST00000439117 LCN2P80188 198 aa13.02□□□□□ -0.33
TSC2-206ENST00000439117 KBTBD11O94819 623 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms